Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1303 ATGCAGAAAATGAGAAAGATGAATTTTGCAACATCATCTTTTCCTTACAATATGTTGATCCACGTTTACTCTCAAACTGGAAATCATGGCAAGACTGAGGCATTGATTCAAGAAATACAAAGGAAAGCAATTCCATGTGATGCATTCACAGTAAGGAATCATGTGTTTGCTTATGTTGTGGCATCTGATATTTCTGCAATGGAAGGGTTCTTGAATCGGATGGGGGAGAATCCCCATATTTCTGTTGATTAG 252 0.377 MQKMRKMNFATSSFPYNMLIHVYSQTGNHGKTEALIQEIQRKAIPCDAFTVRNHVFAYVVASDISAMEGFLNRMGENPHISVD* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1303 83 PANTHER OS12G0527900 PROTEIN 1 83 - -
Vvi4g1303 83 Gene3D Tetratricopeptide repeat domain 1 82 IPR011990 GO:0005515
Vvi4g1303 83 NCBIfam pentatricopeptide repeat 16 47 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1303 Vvi-Chr4 19938598 19938849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1303 - K06712 vvi:100250499 140.584