Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1291 ATGAGCATTGTGGCAGTGAGGCTTGGCTGCGCTGAGCCACCGTTATGGGAAGAGGTTGTGGAGTACATGCTGAATGTGGGTTCCTGCATATGGAGCATGAGAAGAAGCAAAGCTAACTTCTTCATAATTGTGTTTCTGTTTTCTGGTATGATCTCTATGAGTAGGCGGCTTGGTGAAGTCTGTCAATGGAAGAACCCTGTCACTTCAGCTCTAGTTCACGTTGTGTTTTCCATATTGATCTGCTACCCAGAATTGATACTCCCAACCATCTTCCTTTACATGTTTCTAGTCGGGATATGGAACTACCAGTTCAGGCCGAGACATCCTCCACACACGGATACTGAGCTTTCATGGGTAGAAGCAGTTCACCGAGATGAACTAGATGAAGAGTTTGACACTTTCCCTACGTCTAAGCCTCAAGATGTAGTGATGATGAGATATGACAGGCTTAGAAGTGTGGCTGGAAGGATTCAAACTGTGGTGGGAGACATGGCAACATAG 501 0.4591 MSIVAVRLGCAEPPLWEEVVEYMLNVGSCIWSMRRSKANFFIIVFLFSGMISMSRRLGEVCQWKNPVTSALVHVVFSILICYPELILPTIFLYMFLVGIWNYQFRPRHPPHTDTELSWVEAVHRDELDEEFDTFPTSKPQDVVMMRYDRLRSVAGRIQTVVGDMAT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1291 166 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 1 166 IPR047259 -
Vvi4g1291 166 Pfam Plant phosphoribosyltransferase C-terminal 87 166 IPR013583 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1291 Vvi-Chr4 19816688 19817188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1291 1 166 Lipid Metabolism Gene Families AT5G06850 74.096 4.22e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1291 - - vvi:100262254 300.056