Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1288 ATGGGAAGATCTACTGACGATCCTGAGAAGAAGATTCCGAACAGGAGACTCAAGGATGTTGAGATTTGCGTTCCAATATCATATGGGACAATCTCATTCTGGCTGGGTAGAAAAGCCAGTGAGTCTCAGTCGCATAAGTGGACTGTGTATGTTCGTGGGGCCACAAATGAGGACCTTGGTGTGGTGATTCGGCGTGCTGTATTCCAATTGCATCCCAGTTTCAATAATCCTATGAGAGTGGTTGACTCACCCCCGTTTGAGTTATCAGAATCTGGGTGGGGTGAATTTGAAATTGCTATAACCCTCTATTTCCACAGTGATGTCTGTGATAAACAATTAGATTTGTTCCACCATTTGAAGTTGTATCCCGAAGATGAATCTGGTCCCCAGTCTACCAAGAAACCTGTTGTTGTAGAATCATACAATGAGATTGTTTTTCCTGATCCTTTAGATAGTTTTTTTGCTCGTGTAAAGGATCACCCGGCTGTAATTGTGCCCAGGCTGCCTGCTAGTTTTAACTTGCCTGCTCCTGTGCCAATAGAAAATGCCAAGGAAAAGAAGAGAGGTGATACCAAAGATCATCCTTTAAATCAGTGGTTTGTGAATTTCTCGGAGGCAGATGAACTGTTGAAACTGGCAACAGCACGTCAGCAGGTGCAAGCTCATATTGTTAAGCTGAGAAGACAATTGAGCGTGATCGATGGACTGCCTCGGCCATTGAAACCAGCCTCTGATGAGTGA 741 0.4426 MGRSTDDPEKKIPNRRLKDVEICVPISYGTISFWLGRKASESQSHKWTVYVRGATNEDLGVVIRRAVFQLHPSFNNPMRVVDSPPFELSESGWGEFEIAITLYFHSDVCDKQLDLFHHLKLYPEDESGPQSTKKPVVVESYNEIVFPDPLDSFFARVKDHPAVIVPRLPASFNLPAPVPIENAKEKKRGDTKDHPLNQWFVNFSEADELLKLATARQQVQAHIVKLRRQLSVIDGLPRPLKPASDE* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1288 246 Gene3D YEATS domain 17 171 IPR038704 -
Vvi4g1288 246 ProSiteProfiles YEATS domain profile. 16 160 IPR005033 GO:0006355
Vvi4g1288 246 PANTHER PROTEIN AF-9 HOMOLOG 13 236 IPR005033 GO:0006355
Vvi4g1288 246 Pfam YEATS family 43 123 IPR005033 GO:0006355
Vvi4g1288 246 CDD YEATS_TFIID14_like 22 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1288 Vvi-Chr4 19792933 19794939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1288 K11341 - vvi:100257470 505.753