Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1287 ATGGCTCTAAAGAAATCAAACAAACTACCTCAACCAGCAGCTCTGAAACAAATTCTCAAAAGATGTTCAAGCTTTGGGAAGAAACCTGGCTATGATCAAGGTAGCCTTCCAGATGATGTGCCAAAAGGCCACTTTGCGGTATATGTTGGTGAAAACAGAAGCAGATATATTGTTCCAATCTCATGGTTGGCTCACCCAGAGTTTCAAGGCCTACTCCAAAGAGCCGAGGAGGAATTCGGCTTTAATCACGACATGGGTCTTACCATCCCTTGTGAGGAAGTAGTTTTTCTCTCTCTAACAGCCATGATCAGATGA 315 0.4349 MALKKSNKLPQPAALKQILKRCSSFGKKPGYDQGSLPDDVPKGHFAVYVGENRSRYIVPISWLAHPEFQGLLQRAEEEFGFNHDMGLTIPCEEVVFLSLTAMIR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1287 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 101 IPR003676 GO:0009733
Vvi4g1287 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1287 Vvi-Chr4 19786972 19787286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1287 3 103 Calmodulin-binding Proteins AT4G34750 41.748 1.68e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1287 K14488 - vvi:100252339 216.468