Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1286 ATGGACCGCGGTTGGCCCTGGAAGAAAAAAACATCTGATAAGACCATAACTGAGAAAACAGCGGCTACATCAGGTTCTGATAAAGCTTCTTTGGCCTCAGTTGCATCTCTAAGTGATAAGGAAAACTACAACAAGGTCAACTATGTTCAAATATCTTTGGACTCGTATACACATATGACTGGGTTTGAAGCTCAAGTTAATACATTGGAAGGACAAGTCAAAATATTGGAGGATCAAGTAAAGGATTTGAACAAAAAGTTGTCTGAGGCTCATTCAGAGATCACTATGCAAGAAAGCCTAGTTGAACAGCATGCCAAAGTTGCTGAAGAAGCTGTTTCAGGATGGGAGAAGGCTAATGCTGAAGCTCTCGCACTGAAACTTCAACTTGAATCCATCACACTCTTGAGGCTTACAGCTGAAGATCGAGCTTCCCATCTGGATGGTGCTCTCAAAGAGTGCATGAAGCAGGTAAGATGTGTGAAGGAAGAAAATGAACAGAGATTGCATGAAGTAATTCTTACTAAAACCGAGCAATGGGACAAGATCAAGCTTGAGCTTGAAGGAAAAATAGTTGATTTAGATCAAGAACTTCTTAGGTCGAGTGCTCAAAATGCTGCTCTTTCAAAGTCACTGCAAGATCATTCAAACATGCTAATGAAAATCAAAGAAGAAAAATTTCAAGCAGAGGCCAACATTGAACATCTGAAGGGAAACATTCAGTCATATGAAAAAGAAATAAATTCATTGAAGTATGAGCTGCATATAGTTTCTAAGGAGCTTGATATTCGAAATGAGGAAAAGAACATGTCTATAAAGTTAGCAGAAGTTGCAAACAAGCAACACTTGGAATGTGGGAAGAAAATTGCAAAGCTGGAAGCAGAGTGCCAAAGACTTCGTGGCCTCGTCCGCAAGAAATTGCCTGGGCCTGCTGCATTGGCTCAGATGAAGCTGGAAGTTGAGAATTTAGGCCAGAATTTCCATGAACCTCGACTAAGGACTCCAGTTAAGAGTCCTAACCTACATTTGTCTCAATTATCAGAGTTTTCAAATGAAACATTGCAGCAAAACCAAAAGGAGATTGAGTTTCTTACTACTCGTTTATTGGCAATGGAAGACGAAACAAAGATGCTGAAAGAAGCTTTGGCTGCTCGTAACCATGAACTGCAGACTTCAAGAAGCATGTGTGCAAAGGTAGCTGGCAGACTTAAGAGCCTAGAAGCGCAACAGGATCTTCTTCAACAGAGAAGCTCTCCAAGATCAAATTATGGGGTCCCTACTGAAGGTTCCTCAAGTCAAAATGGTAGCAATCCTGCCAGTGTAGCTTCAACGTCTGAAGATGGGATTGATGAAGAAGGAAGCTGTGTGGAGTCTTTGGCAACATCTTTGATCTCTGATCTCCCCCATTGTAGGGGGAACAAGAGGCTTGGAAAATCTAGGAAACACAATAACTTGAATCATTTGGATTTAATGGATGACTTTCTAGAGATGGAGAGATTGGCACATTCATCAAATCACTCTAATGGGGTCAGTTCCATCATAAAAGATTTAAATAATGAGAAGGGTGATATTGCATGCCACAGCACATTAGTTGATGTTGCAAAGAGTGGGAACCTTCCATCTGAATGGCCAACTGATTCAAATTCATCACCAAATCAGGTTTCTTCCTGTTTGGAATCTTCAGCAATTGAACATGGTCTTTGTGTGGATCACCTTCTCTTGTTGAAACTCCAATCAAGAATTTCAATTATACTTGAGTCTCAAACCACGGACACTGATAAGGGTAAGATTTTGGAAGAGATCAAATGTGCTATGCAGGATATACAAGATTCTATGCATCAGCAGTCGGCAAGTTGTTTTTATGAGGGAACTCATCCTGATGATGCTTCACACAATTGGGAAGCTTGTCCTCAAGATACTAGGGAAACCAAAGATAGCAAGATCTTGTTGGGTGAGGATGGTAAACCCTGTACAGGTAAGGAACATGTTATAAACCAAAATTTGGTGGCTGCTGTTTCCCAAATTCATCAATTTGTATTATCTCTGGGCAAGGAAGCTATGCAAGTTCCAGATACTTCTACTGTGAGAAATGAGATAATTAAAAATATCGAGGACTTCTCTACCTCTGTTGATAAATTCCTGTTCAACAAACTAAGTTTGGTGGAATTTTTCCTTGGTCTTTCTCATATTTTGATCAAAGCTAGTGAGCTGAAATCTAGTGTCCTGGACTGTAAGGGTCATGAAGGAGAAACTACTACTTTTGACTGCATTGACAAGGTTGCTTTGCTAGAGAATAAGGTGGTTAAGGATGAGTCATCAAGACAGGGATTTCCCAGAGGGTGTGATTACAATTCTCATTCCACTTCTGATCCTGAGATTCTGCAAGAAGAAAACTTAAGTCCAGGTTTTTGGTCTGATCTCTCATCATGTAAATGCTCATTAAAGGATTTGGAACTGCTGCAATCATGTAAAGATAACATGGAAATGGACTTAGCTAGGTGCACTCAGGATCTTGAGAGCACAAGGTTGCAATTAAAGGAAATGGAGCAGCTTCTAACAGAATTAAAATCACAGTTGGCTTTATCACAAAAATCAAGAAGCCTGGCAGAGACTCAGCTGAAATGTATGACAGAGTCTTATAAATCACTTGAATTGCATGCACAGGAATTAGAAGCTGAGGTGATCAGTCTACAAGAAAAAATGGAGAATCTAAATTATGAACTTCAAGAAGAAAAGGACAGTCATCAGGATGCTTTGGCCAGGTGTGAGGATCTTCAAGAGCAACTGCAAAGGGTCAAGAGCCATTCCATGAGCTTGCTATCTTCTGCTGCAGAATTTGATGTGAAGTCTACACAGGAGAGAGAGATAGCAGCTGCAGCAGAGAAGCTTGCAGAGTGTCAACAGACCATAGACATTCTTGGCAGACAATTGAAATCTATGCAACCTCAAAGCAAGTTCATTGAGTCCCGGGATAGCAGGAGGCTTCAATCGAATGAGGGCTTAGTAGGAGATAAACCATGTCATAGTGTTTCAAAGAAACAAGCCGTCTTCAACTCCAGTGAATTTTACCAGGCTGATATGCTCCATGCTAGTCCCACAGCTACACAAGACATGGGTGAGAAGCTCCTGCATATTTCAAATTCTCCATCTAGTCCATCCAACGTTGAACCAAACCTGTTACCAAGATCTCCAATAAGCCCAAGCCACCATCACAATAAGCCTAAAAAGTCATCTTCCTCTTCTGCTATGTTGGCGCCTGAGAAACATCTCCGTGGTTTCAGTAGCTTCTTTGCTTCAAGAGGGAAGAAGGGGAATGGGCGGTAG 3321 0.4101 MDRGWPWKKKTSDKTITEKTAATSGSDKASLASVASLSDKENYNKVNYVQISLDSYTHMTGFEAQVNTLEGQVKILEDQVKDLNKKLSEAHSEITMQESLVEQHAKVAEEAVSGWEKANAEALALKLQLESITLLRLTAEDRASHLDGALKECMKQVRCVKEENEQRLHEVILTKTEQWDKIKLELEGKIVDLDQELLRSSAQNAALSKSLQDHSNMLMKIKEEKFQAEANIEHLKGNIQSYEKEINSLKYELHIVSKELDIRNEEKNMSIKLAEVANKQHLECGKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGQNFHEPRLRTPVKSPNLHLSQLSEFSNETLQQNQKEIEFLTTRLLAMEDETKMLKEALAARNHELQTSRSMCAKVAGRLKSLEAQQDLLQQRSSPRSNYGVPTEGSSSQNGSNPASVASTSEDGIDEEGSCVESLATSLISDLPHCRGNKRLGKSRKHNNLNHLDLMDDFLEMERLAHSSNHSNGVSSIIKDLNNEKGDIACHSTLVDVAKSGNLPSEWPTDSNSSPNQVSSCLESSAIEHGLCVDHLLLLKLQSRISIILESQTTDTDKGKILEEIKCAMQDIQDSMHQQSASCFYEGTHPDDASHNWEACPQDTRETKDSKILLGEDGKPCTGKEHVINQNLVAAVSQIHQFVLSLGKEAMQVPDTSTVRNEIIKNIEDFSTSVDKFLFNKLSLVEFFLGLSHILIKASELKSSVLDCKGHEGETTTFDCIDKVALLENKVVKDESSRQGFPRGCDYNSHSTSDPEILQEENLSPGFWSDLSSCKCSLKDLELLQSCKDNMEMDLARCTQDLESTRLQLKEMEQLLTELKSQLALSQKSRSLAETQLKCMTESYKSLELHAQELEAEVISLQEKMENLNYELQEEKDSHQDALARCEDLQEQLQRVKSHSMSLLSSAAEFDVKSTQEREIAAAAEKLAECQQTIDILGRQLKSMQPQSKFIESRDSRRLQSNEGLVGDKPCHSVSKKQAVFNSSEFYQADMLHASPTATQDMGEKLLHISNSPSSPSNVEPNLLPRSPISPSHHHNKPKKSSSSSAMLAPEKHLRGFSSFFASRGKKGNGR* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 1042 1085 - -
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 1042 1060 - -
Vvi4g1286 1106 Coils Coil 823 864 - -
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 411 451 - -
Vvi4g1286 1106 Coils Coil 872 934 - -
Vvi4g1286 1106 Coils Coil 59 93 - -
Vvi4g1286 1106 Coils Coil 204 259 - -
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 980 1006 - -
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 1 21 - -
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 411 443 - -
Vvi4g1286 1106 Coils Coil 353 373 - -
Vvi4g1286 1106 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1100 - -
Vvi4g1286 1106 MobiDBLite consensus disorder prediction 1 16 - -
Vvi4g1286 1106 Coils Coil 948 975 - -
Vvi4g1286 1106 Pfam Filament-like plant protein, long coiled-coil 98 984 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1286 Vvi-Chr4 19776726 19782459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1286 - - vri:117912013 2070.43