Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1284 ATGACGTTTTCGGGGAGGCATGTGTCTCTTCCTTACTCGAGAATCATATGCTCTGTTGTTTTAATCATTTTAACGGCCGAGAGAGCTGTGAGTATAAGATTTCCCGATCGGATCTCGGAAAGCGTGAAGGCTTCGTCCAATCAGCCTCTGAAAACGGCGGTTTTCGCTCTCGGAAGCTTTTGGAGATCCGAGGCCGTGTTTGGATGCTTGGATGGAGTTGTACGGACCACCGCGGGTTACGCCGGTGGATCCAAGGCCAACCCCGAGTACAGAAGCTGGGGCGATCATGCCGAGTCAGTTCAGATTGAATACAATCCCAGGCTGATTACTTTCAGGCAACTTTTAGAGGTTTTCTGGTCTAGTCATGATTCTAGGCAGGTATTTGGGCAAGGCCCTGATGTGGGTAACCAATATAGGTCTATTATCTTTACTAATGGGACTGAAGAGTTGAGACTGGCTGCTGTCAGCAAAGAAAGAGAACAAACTGTGTCAAAGAGCAGTATTGTGACTACTCAAATTCAACAACTTGGAAAATTTTGCCCAGCAGAGCCTGAACATCAGAAATTTGAGCTCAAAAGAAATCCTTTCCTCATTCAGCTGATGGGGAACTTGCCTGAAGAAGAGCTAGAGAAATCAACTCTGGCAGCAAAACTGAACGGTTTTGCAGCAGAGCTTTGCCCACCGAAGGTTCAGCAGCAAATTAATGCAAGGATTGAGGAGATCATTAGAAAAGGTTGGCCCATTTTGAGAGAAGTGTAG 759 0.4638 MTFSGRHVSLPYSRIICSVVLIILTAERAVSIRFPDRISESVKASSNQPLKTAVFALGSFWRSEAVFGCLDGVVRTTAGYAGGSKANPEYRSWGDHAESVQIEYNPRLITFRQLLEVFWSSHDSRQVFGQGPDVGNQYRSIIFTNGTEELRLAAVSKEREQTVSKSSIVTTQIQQLGKFCPAEPEHQKFELKRNPFLIQLMGNLPEEELEKSTLAAKLNGFAAELCPPKVQQQINARIEEIIRKGWPILREV* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1284 252 FunFam Peptide methionine sulfoxide reductase A5 46 247 - -
Vvi4g1284 252 Gene3D Peptide methionine sulphoxide reductase MsrA 45 246 IPR036509 GO:0008113
Vvi4g1284 252 SUPERFAMILY Peptide methionine sulfoxide reductase 29 193 IPR036509 GO:0008113
Vvi4g1284 252 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 50 204 IPR002569 GO:0008113
Vvi4g1284 252 Pfam Peptide methionine sulfoxide reductase 52 192 IPR002569 GO:0008113
Vvi4g1284 252 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 51 195 IPR002569 GO:0008113
Vvi4g1284 252 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 44 200 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1284 K07304 - vvi:100241959 502.671