LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi4g1282	ATGAAGCTATCGAAGAGTTCGAAGAAGGTTTCTTGGGCTCCCGATGCTAATCTGTGTCAGGCAAAACTGTTTCGATCAAAGGATTGTCCTTCACAAGTTTGCTTGAAAGCTCGTGATGGTCTTCTAGCAAAGAAATCATGGATATTGCATTCTGATGGCCGGGACACCAATGGCCTCCCTCATGGATTCAAAGACACTCGTGTGAACCAATCGAAGAAGAAAGTTTCGCACATCCCTAAGATCAAATGGAAATGCCCACCCAAGTTTGTCTTGAGTTCCAATTGGCTCGTTGCATCTGGTGAAGAAAGCCAAGAGGCAGAGGCTCAAAAGCTGAGAGAAAATCATGTAGTTGAAGCAGTTTATCCTCGCATATCTGCTATACCTCTTAGCCCCTCTATTTCATTGGACATAGAAGAATGCCATCAGGATGATTGTGACATCCCTCTTGTCCCCATCACATCCATGGAAGATGAAGGAACAGTGGATACATTGTTTGATTTGGCAGCACCAATCAACTCTTCCATGATTTCAAAGCCACCAGCCTTGTCCCAAGATTTATTGGCATCTGGAAACACCTCCCAGTGCAACAGGCCTGTTCTAGAGCCACCTGCCATTGAAAAAACTGCACTTGGCTTGTCACCGGATGTAGAAGCTGATATAATTGCTGCAGCTACTGCTGCCATTACCATGGTCATGAGATGCAAGGAGCAGGGAAGCTTGATTGACACAGATTTGCTCATTAAAATCCTTACCAACCCAAAAATGACTGAGAAATTGATTAATGATTGTCGAGAACCTGGAGGTACCAGTACTATACCCTTTTCTGAGTCAAAACCGGTAACTCAGTTGGTTACCGTATCCTGTTCAGAACCTGCTATGGTATTGGAGCCAAGGCCAGCCAATGAAAATATGTGTTATCAACCAAAGAGGGTGCGGCCTGCTCTAGATTCAAGGTCTCCCCAAGAAGATACTTTTCCAGTCTCTAGGTCAAAGCAAGTTGCTCATCGAGTTCCCTTACCTCACACAAATGGGAATATGTGTTCTCTACCAGGCGACAAGAGACCTGCTCTAAATTCAAGCCCTCTCCAGCCAGATAACTTTCCAATCTCGTGTTCAAAGCCTGTCACCCTTCCAAAGCCAGAAAGTGGAAACATTTATCCTCTGCCCAATGGGATGCTACCAGACTCAAATTCAAGGCTTTCCATACCCAATACTGTTACAGTTTCTTTGTCCCCAGCTCCCTTACCCAGCAAAGGACCTAATATGGTTTTGTTGTCTCAGCCAGCAAAAGTTAACTTATGTTCCATTCCAAATGATGTGCAACCTGCCATAAATTTGAGACCTCCCCAAGCAGATGCTGTCCAATTCTCTAGGTCAAAGCCAGCAAATGGAAACATGTATTCTCTTGTAGATGAGGTGCTAGCTGCTGCCTCAAATTCCAGGCCTCCCCAGCTAGATACTGTTCCCGTCTCTAGTTCAAAGCCTGTCAGTCTTTCGGTTCCCGTTTTACCCAGCATAGAAGTTGATATGGTTGCCACACAGAAGGCAGCAAATGAAAACTTCTACCCTTTATGGAGTGGGTCGGGATCTACTGTAAGCACAAGGTATTCTCGAGAGCCTATGGTTCCATTATCTGGGTTTAATCCTGCACCTCTCTTGGTTCGCTCTTCTGTCCTAGAGCCTAGGGTTTTGTCACCAAGACCAACAAATGGAAACTTGCACAACATACTGAAAGGAGTACAACCAACTTTAAACACAACACCAACTTTACCAGACATCTTGCCAACATCCTCTTTCAAAGCTATAAAATCTCATGTGAAGGACGTCAACTACTATAAGAGCCTCGTTAAGCAACACGGAGGAGAAAAGCAAGGAACTCAGGATCAAATCATCCCACAGTATGCTAACCATGAAAATTACCTTCAAGGCATGGAACTGATACAGAACTTCAAACCAACAGAATTGAAACCGAAGTCTCAGAAGTCTTGCATCTTCTATAACAGCCCAACAGGATGTCGAAATGGAACCAATTGCCCTTACCAGCATGACACGTTCTCTCAATTGCGTTGTGGCAGCATGCTGGAAGATAAAAGGGCAAAGAGAATGAAACTAGATGGGAAAATTACAGGCAGAAAATAA	2139	0.4437	MKLSKSSKKVSWAPDANLCQAKLFRSKDCPSQVCLKARDGLLAKKSWILHSDGRDTNGLPHGFKDTRVNQSKKKVSHIPKIKWKCPPKFVLSSNWLVASGEESQEAEAQKLRENHVVEAVYPRISAIPLSPSISLDIEECHQDDCDIPLVPITSMEDEGTVDTLFDLAAPINSSMISKPPALSQDLLASGNTSQCNRPVLEPPAIEKTALGLSPDVEADIIAAATAAITMVMRCKEQGSLIDTDLLIKILTNPKMTEKLINDCREPGGTSTIPFSESKPVTQLVTVSCSEPAMVLEPRPANENMCYQPKRVRPALDSRSPQEDTFPVSRSKQVAHRVPLPHTNGNMCSLPGDKRPALNSSPLQPDNFPISCSKPVTLPKPESGNIYPLPNGMLPDSNSRLSIPNTVTVSLSPAPLPSKGPNMVLLSQPAKVNLCSIPNDVQPAINLRPPQADAVQFSRSKPANGNMYSLVDEVLAAASNSRPPQLDTVPVSSSKPVSLSVPVLPSIEVDMVATQKAANENFYPLWSGSGSTVSTRYSREPMVPLSGFNPAPLLVRSSVLEPRVLSPRPTNGNLHNILKGVQPTLNTTPTLPDILPTSSFKAIKSHVKDVNYYKSLVKQHGGEKQGTQDQIIPQYANHENYLQGMELIQNFKPTELKPKSQKSCIFYNSPTGCRNGTNCPYQHDTFSQLRCGSMLEDKRAKRMKLDGKITGRK*	713

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi4g1282	712	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	2	706	-	-
	Vvi4g1282	712	ProSiteProfiles	Zinc finger C3H1-type profile.	657	685	IPR000571	GO:0046872
	Vvi4g1282	712	MobiDBLite	consensus disorder prediction	313	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi4g1282	Vvi-Chr4	19732143	19742086	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi4g1282	-		-	vvi:104879131	1384.39