Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1275 ATGGAAGGTGATGGGAGAATGGAGGTGGGACTCGCTTGGCTTCTGAGAGCGGCGTGGATTGCGGGAACATTGCCCATATTGGTCGCTTCAATCCCTTCTTCTCGGCTCAGTCCCGTCCATGGAGTTTTGTCAGGATTCGCAAGTAGAGGCAAGACTCTGCAATCTTCGTCCCAAAAGTTGACGGTGCCACAGAGTTTTTTCTCGCATTTTTACTTGGTGGCCGTGGTGTGGACGACAATCTTGCTACTTGCAACATGGTACTATGCATATAAAATGGCACCATTGGATTCTGTGTCATTGGATTACTCCACCATTGCCAGCCACTTGACTGGAGGTTCCCATATACTTTCACTGCACAAGTCTCGTTCTACCTCTGCACAGCACAGATACAGGGTATGGAGACCCGTGTTTTTGCTTTTATTGATGGAACTGCATGTCATGAGGCGTTTATATGAGACGCTATATGTCTTTAACTACAGCAGTTCAGCCCGAATGCACATTTTCGGCTATCTAACTGGCCTTTTTTTCTATATAGCAGCACCCCTTTCTCTTTGCACCTGTTGTGCTGTAGAGGTTTTTAACTTTACAGCTGATCAAGTGGCTGAGATCAATGTTGAAGGCAGAGATTTGTTGTCAATCACTGGGTCTGATTGGTGGGGATATGTGAAGCCTATTACAAAACTTGGATGGTTTGAGTGGATTGGTGCAGCTATATTCATTTGGGGCTGGGTTCATCAATGCCGATGTCATGCAATTCTTGGCTCAATACGAAAAGAAAGAACTGGTGAATATCGAATTCCTCATGGTGATTGGTTTGAACTTGTTTCAAGTCCACATTACTTGGCAGAGATGGTTATATATGCAGGCTTATTGGTTGCAAGTGGGGCAGCTGACTTCACTATTTGGCTACTTTTTGTATTTGTGGTGGCAAATCTGGGCTTTGCAGCTGCAGAAACACAAAGGTGGTACCTCCATAAGTTTGAGGACTATCCACGCAAACGCCGTGCTTGTCTTCCATATATCTACTAG 1029 0.4519 MEGDGRMEVGLAWLLRAAWIAGTLPILVASIPSSRLSPVHGVLSGFASRGKTLQSSSQKLTVPQSFFSHFYLVAVVWTTILLLATWYYAYKMAPLDSVSLDYSTIASHLTGGSHILSLHKSRSTSAQHRYRVWRPVFLLLLMELHVMRRLYETLYVFNYSSSARMHIFGYLTGLFFYIAAPLSLCTCCAVEVFNFTADQVAEINVEGRDLLSITGSDWWGYVKPITKLGWFEWIGAAIFIWGWVHQCRCHAILGSIRKERTGEYRIPHGDWFELVSSPHYLAEMVIYAGLLVASGAADFTIWLLFVFVVANLGFAAAETQRWYLHKFEDYPRKRRACLPYIY* 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1275 342 PANTHER DFG10 PROTEIN 7 342 IPR039698 GO:0003865|GO:0006488
Vvi4g1275 342 Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase 216 342 IPR001104 GO:0006629|GO:0016627
Vvi4g1275 342 Gene3D - 210 341 - -
Vvi4g1275 342 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 235 317 IPR001104 GO:0006629|GO:0016627
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1275 Vvi-Chr4 19667744 19672603 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1275 K12345 - vvi:100243811 707.983