Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1272 ATGCGAATCACAACAAGACTCACAATTGAAATAGAAATAAGGGTTAGGAAATTAGAAGTTCAGGGCATACCGTCAAAACATGCTGAGGCCATAACATCTACCATAACTGAAGTCTTGAATGGTAGTTTGGAGAATGTGGCTCAGTCCTTGGTTTCTAAGGGCGAAATACAGAAAATTGAAATGACTCAAGAATCCAATTTGTCCAAATTCAAATCTGAAGTTGAAAGCTCTCAGGTACTGGCTTATTTAGCAAGTGATAACCTTTTTCATGACTGA 276 0.3768 MRITTRLTIEIEIRVRKLEVQGIPSKHAEAITSTITEVLNGSLENVAQSLVSKGEIQKIEMTQESNLSKFKSEVESSQVLAYLASDNLFHD* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1272 91 PANTHER UNCHARACTERIZED 15 78 IPR024461 -
Vvi4g1272 91 Gene3D - 13 88 - -
Vvi4g1272 91 Pfam Coiled-coil domain-containing protein 90-like 15 78 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1272 Vvi-Chr4 19659930 19661398 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1272 - - vvi:100247201 117.087