Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1266 ATGAGGCTGGTCCTCATTTTGACAACGTTTTCGTTGCTGTGCTTGGCCTCCAATGGCGCTATAACTTCTCGATTGCTTCAGCGCAATTCTCATAGCAGCAATTTCTTGACCACCGACGAACTCTGGTTCAATCAGACTGTCGATCACTTCTCCCCTTTGGATCACAGTAAGTTTCCGCAACGGTACTATGAATTCACTGACTACTTTCGACTTCCTGATGGACCGATTTTTTTAAAGATATGTGGAGAAGCTTCATGCGATGGGATACCCAATGATTATATCAGTGTTTTGGCAAAGAAATTTGGAGCAGCTGTGGTTTCTCTTGAGCATCGCTACTATGGAAAGAGTTCCCCCTTTCGGTCTCTGAGAACAGAAAATCTGAAATATCTTTCATCTAAGCAGGCACTTTTTGATTTGGCCGTTTTCCGTCAATATTATCAGGAATCCTTGAACGTAAAAGTCAATCGATCAAATGTTGAAAATCCATGGTTTGTTTTTGGTGTTTCGTATGCTGGTGCTCTTAGTGCATGGTTTCGTCTAAAGTTCCCACATTTAACATGTGGAAGTCTTGCCAGTTCTGCAGTTGTCCTTGCTATTTACAACTTTACTGAATTTGACCGTCAGATTGGAGAGTCAGCTGGTGCTGAATGTAAAGCTGTATTACAAGAAGTTAATGGACTTGTTGAACAGAGGCTTGCAGTTGATGGAAATGCTGTGAAGTCATTGTTTGGTGCTGCTAGTCTCAAGATTGATGCTGATTTCCTGTATCTTCTGGCAGATGCTGCAGTTACAGCATTTCAATATGGTAATCCAGATATGCTATGCTCCCCTCTTGTTCAAGCGAAAAAGGATGGAGAGGATCTGGAGAATGCGTATGCCACATATGTAAAAGAGTATTATCTTGGAACCTTTGGTGTCAGCATTGAAACTTATAATCAGCAGCATTTGAAAAGAACTAATTCCGCTGGGGATACATCTGATCGGTTGTGGTGGTTCCAAGTTTGCACTGAAGTTGCATTCTTCCAGGTGGCACCCTCAGATGATAGCATGCGCTCTTCAGAGATTAATACAAAGTACCATTTAGACCTATGCAAGAATGTCTTTGGCAATGGCATCTATCCTGATGTTGATGCAACAAATATATACTATGGAGGCACAAAAATTGCTGGTTCAAAAATAATTTTTACGAATGGCTCCCAGGACCCCTGGCGACATGCATCCAAACTGACCTCAACCCCGGACATGCCTTCCTTCCTTATTTCTTGTCATAATTGTGGCCATGGAACTGATCTGCGAGGATGTCCCCAATCTCCTTTAAGCCCTGAAGGTGATGCCAAGAACTGTAGCTCTCCTGATGCAGTTCACAAAGTTAGGCAACAGATCATAGAACACATAGACCTGTGGCTGTCCCAGTGCCAGGCCACAGGTAGGAGTTATATGTGA 1443 0.429 MRLVLILTTFSLLCLASNGAITSRLLQRNSHSSNFLTTDELWFNQTVDHFSPLDHSKFPQRYYEFTDYFRLPDGPIFLKICGEASCDGIPNDYISVLAKKFGAAVVSLEHRYYGKSSPFRSLRTENLKYLSSKQALFDLAVFRQYYQESLNVKVNRSNVENPWFVFGVSYAGALSAWFRLKFPHLTCGSLASSAVVLAIYNFTEFDRQIGESAGAECKAVLQEVNGLVEQRLAVDGNAVKSLFGAASLKIDADFLYLLADAAVTAFQYGNPDMLCSPLVQAKKDGEDLENAYATYVKEYYLGTFGVSIETYNQQHLKRTNSAGDTSDRLWWFQVCTEVAFFQVAPSDDSMRSSEINTKYHLDLCKNVFGNGIYPDVDATNIYYGGTKIAGSKIIFTNGSQDPWRHASKLTSTPDMPSFLISCHNCGHGTDLRGCPQSPLSPEGDAKNCSSPDAVHKVRQQIIEHIDLWLSQCQATGRSYM* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1266 480 FunFam Prolyl carboxypeptidase like protein 36 274 - -
Vvi4g1266 480 Gene3D alpha/beta hydrolase 36 254 IPR029058 -
Vvi4g1266 480 Gene3D alpha/beta hydrolase 292 473 IPR029058 -
Vvi4g1266 480 SUPERFAMILY alpha/beta-Hydrolases 47 204 IPR029058 -
Vvi4g1266 480 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 22 471 - -
Vvi4g1266 480 FunFam Thymus-specific serine protease 287 473 - -
Vvi4g1266 480 Pfam Serine carboxypeptidase S28 45 421 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1266 Vvi-Chr4 19607770 19615813 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1266 - - vri:117912515 974.541