Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1262 ATGTTGCAGAGACCTAGACGAAGGTGCGAGGGCACGGCCATGGGTGCCATCGTTCTGGATCTTAAGCCCGGACTTGGAATAGGGCCTTTCTCCCTTGGGATGCCGATCTCCAAAGCGTTTGCTCAAATAGAGCAACAGCCTAACATTTACGATGTTGTCCACGTCAAGTATTTTGACGAGGAGCCATTAAAGCTGGATATAGTCATTAGCTTTCCAGATCATGGTTTTCATCTTCGTTTTGATCCTTGGTCGCAGAGGCTACGCCTTATCGAGATTTTTGATGTCAAACGGCTTCAAATGCGCTATGCCACTTCTCTGATTGGGGGTCCATCAACTCTAGCTACTTTTGTAGCTGTATATGCACTTTTTGGACCAACTTTTCCAGGAAGTTACGACAAAGATAGAGGTGTTTACACTCTGTTCTACCCGGGTTTATCTTTCGCTTTTCCAATTCCCACCCAGTATACAGATTGCTGCCATGATGGAGAAGCGGAGTTGCCTTTAGAGTTCCCAGATGGTACTACTCCAGTTACATGCCGTGTGTCTATATATGATAGTTCTACAGACAGTAAGGTTGGTGTGGGATCCTCAATGGAAAAAGCTTCTGCTCCTCCATTACCTGCTGGCAGCCTCTACATGGAAGAAGTGCATGTTAAGCTTGGGGAAGAATTACGGTTTACTGTTGGTGGTCAGCATATTCCCTTTGGTGCATCACCACAGGATGTGTGGACTGAATTAGGCCGTCCTTGTGGAATCCATCAAAAGCAGGTTGACCAAATGGTAATTCACTCTGCCTCAGATCCTCGCCCACGGACAACTCTCTGTGGTGATTACTTCTACAATTATTTTGATCGTGGTTTGGACATACTATTTGATGGGCAGACTCATAAAATCAAGAAATTTGTCTTGCACACAAACTATCCTGGGCATGCAGATTTTAATTCATACATGAAATGCAACTTTGTTATCTATGGTTCTGATTTTGGTGGTTCTTTTCAGGAAGTAAAAATGTCCAAACACAGAATTACGCCAAGCACAAAATGGGAGCAAGTGAAGGAAATCCTTGGGGACTGTGGCCGTGCAGCTATTCAAACGCAAGGTTCTACAAACAATCCATTTGGATCTACTTTTGTGTATGGTTATCAAAATGTTGCATTTGAGGTAATGAAGAATGGATATATTGCAACTGTAACTCTCTTCCAGTCGTGA 1209 0.4376 MLQRPRRRCEGTAMGAIVLDLKPGLGIGPFSLGMPISKAFAQIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPGLSFAFPIPTQYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAPPLPAGSLYMEEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYGSDFGGSFQEVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVMKNGYIATVTLFQS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1262 402 PANTHER UPF0183 PROTEIN 17 402 IPR039156 -
Vvi4g1262 402 Pfam Phagosome assembly factor 1 27 400 IPR005373 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1262 - - vvi:100852920 837.795