Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1260 ATGTCATCGTTCTTGACGCCGACGCAAAGGTACGCTGCGGGGGCATTGTTGGGACTGGCCCTTCAACAGGCCCAGATCCACCAGACCCGCCCTTTGGGCTCCTCCATTGAAGAAGATGAGCGCATCAGCAGTGGTAGCAGTTCCGACTCCGTCTCCGAGGACCCTCAGCTTTGGGTCCACGAAAACTCCGGCCTTCTCCGTCCTGTGTTCAAGTCTCTAAAGATTGAAAATAAGGCATGGACTGGGCTTGAGGAAACTGCTGGCTCTTCTCCAGCAAAGCACCATGTTGGAGCATTCTTGAGGTTAATCTCAGAAGAAAGTGCCGAGTCTTCTGCAGATATGAAGGACGCAGAACTTGCTTTGTCAAAAGCTGTTGATGTTATGGAATTAAGCATGGAAACAACTTCTGAGACATCCATGTCTAAGAAGGAGAAGCATAGAGAGTATGAGAATAAATGTCGGGAGAAATGTTCTCCTGCTGACATGCAACCAAACTCTGAAGTGGTAGATGTGCCTTTACAAGCACAGGAGCTAAAAAATTGTAACGAGCTTAGCATTGAACAGACACCTTATGGTTCCAGCAGTAAATTTGATGAGAAACCTGTGGAAGAGGTAGCAATGCTTAATTATCCGAGGAAAGTGACTGTTTTGTATGAGCTTCTTTCAGCTTGTCTGACAGATACACCTGAGGATAACAAAAAATCTACTCGGAAAAGAAAGGGCTATGATGCTCGACATCGTGTAGCTCTGAGGCTGCTGGCAACCTGGCTTGATATCCAGTGGAAAAAAGTGGAAGCCATGGAGATTATGGTTGCTTGCTCTGCAATGGCTTTGTCAAAAGAGCAAGCATCAAAGGAAGAAGAAACCCAGTCCCCAAAAAGCCAATGGACTAAATGGAAACGAGGAGGTATCATTGGTGCAGCTGCATTAACAGGAGGAACCTTAATGGCTATTACCGGTGGTTTGGCTGCTCCAGCAATTGCTGCAGGATTTAGTGCATTAGCTCCTACTCTAGGCACAATAATTCCGGTGATTGGAGCAAGTGGGTTTGCAGCAGCTGCCAGTGCTGCAGGAACAGTTGCTGGTTCTGTTGCAATTGCTGCATCATTTGGAGCTGCTGGTGCTGGACTCACAGGGAGTAAAATGGCTAGAAGAACTGGAAGTGTCGATGAATTTGAGTTCAAAGCTATTGGAGAAAACCATAACCAAGGCCGGCTAGCAGTTGAGATCCTGGTATCAGGATTTGTATTTCAGGAGGAAGATTTTATAAGTCCTTGGGAAGGACAAAATAATAACTTGGAAAGGTATGCACTACAATGGGAGTCTAAGAATCTGATTGCTGTAAGCACTGCAATCCAAGATTGGCTTACATCAAGCATTGCACTGTCAATGATGAAGCAGGGTGCCATGTTGACTGTATTAAGCACGCTAATGACAGCTTTGGCTTGGCCGGCAACACTACTTGCAGCTACCGATTTCATAGACAGCAAATGGACTATTGCTCTGGACAGGTCAGACAAAGCAGGAAAACTGCTAGCTGAAGTCTTACAGAAGGGATTGCAAGGGAACAGGCCTGTGACACTCGTAGGTTACTCTCTTGGAGCACGAGTGATTTTCAAGTGTCTGCAGTATTTGGCTGAAACTGAACAAAATGCTGAACTTGTTGAAAGAGTTGTTCTTCTTGGAGCACCCATTTCGTTCAGAGATGAGAACTGGGAAGTTGCTAGAAAAATGGTGGCTGGAAGATTTGTGAATGCATTCTCTACAAATGATTGGACACTTGGGGTTGCCTTTCGTGCTAATCTACTTACTAAAGGGTTAGCTGGAATTCAACCAGTTGATGTTCCAGGGATTGAGAATGTTGATGTAACAGAGTTGATTGAAGGCCACTCTTCGTATCTATGGGTTACCGAAGACATCCTGGATCGGCTCGAACTGGATACTTACTATCCTGTTTTTCGGGGCAGTCCTACGGAACACCAGAAGTGA 1989 0.4575 MSSFLTPTQRYAAGALLGLALQQAQIHQTRPLGSSIEEDERISSGSSSDSVSEDPQLWVHENSGLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAESSADMKDAELALSKAVDVMELSMETTSETSMSKKEKHREYENKCREKCSPADMQPNSEVVDVPLQAQELKNCNELSIEQTPYGSSSKFDEKPVEEVAMLNYPRKVTVLYELLSACLTDTPEDNKKSTRKRKGYDARHRVALRLLATWLDIQWKKVEAMEIMVACSAMALSKEQASKEEETQSPKSQWTKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVAGSVAIAASFGAAGAGLTGSKMARRTGSVDEFEFKAIGENHNQGRLAVEILVSGFVFQEEDFISPWEGQNNNLERYALQWESKNLIAVSTAIQDWLTSSIALSMMKQGAMLTVLSTLMTALAWPATLLAATDFIDSKWTIALDRSDKAGKLLAEVLQKGLQGNRPVTLVGYSLGARVIFKCLQYLAETEQNAELVERVVLLGAPISFRDENWEVARKMVAGRFVNAFSTNDWTLGVAFRANLLTKGLAGIQPVDVPGIENVDVTELIEGHSSYLWVTEDILDRLELDTYYPVFRGSPTEHQK* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1260 662 MobiDBLite consensus disorder prediction 30 56 - -
Vvi4g1260 662 Gene3D alpha/beta hydrolase 492 614 IPR029058 -
Vvi4g1260 662 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 2 655 IPR007941 -
Vvi4g1260 662 Pfam Protein of unknown function (DUF726) 298 646 IPR007941 -
Vvi4g1260 662 MobiDBLite consensus disorder prediction 39 56 - -
Vvi4g1260 662 SUPERFAMILY alpha/beta-Hydrolases 500 593 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1260 Vvi-Chr4 19509099 19523308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1260 - - vvi:100245553 1168.68