Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1258 ATGGCCGCATTTGCGGCTTGTAGGTACGCCGGGAAAATTGGGAAGGTTTCAGGAATCGGGACTGCTCTCAACAACTTCAAAGCATTTAGTGTGGAGGGGAAATCGAATACGATCCAGTTCTTAGCTTTTTTATCTTCTTTTTCTTCGCCTTCTGGATATTGCAGAAGATCTGATTATAGGCCGTTTTCTCAGTTCGTGAAGTCTAATGGAGGGCGATTGTTCCTAGTTGACACATTGGCTCTGGTTAGGAAATTAGAAGCTCAGGGCATACCGTCAAAACATGCTGAGGCCATAACATCTACCATAACTGAAGTCTTGAATGACAGTTTGGAGAATGTGGCTCAGTCCTTGGTTTCTAAGGGCGAAATACAGAAAATTGAAATGACTCAAGAATCCAATTTGTCCAAATTCAAATCTGAAGTTGAAAGCTCTCAGGGACATCATTTTTCTCTCTTGCAACATGAAACTGAGAAACTTCGAAGTGATATAGAAAAGATGCGTAGTGAACTAAGGTATGAAATTGACAAAGTGACTGCTGGACTACGTTTAGATTTGAATCTTGAAAGGGGGAGGATACGGGATGAGTTAGCAAATCAGAATGCAGAAACCACTAGCCTCACTAACAAACTAGATCGGGAAATTCATGCACTAAGGGCTCAGTTGGAAGCTGCAAAGTACGATGTGATAAAATACTGCATAGGTACCCTTGTTTCTATTTCAGCTGTGGGTCTTGCTGTGATTCGCATCTTGATGTAA 756 0.4167 MAAFAACRYAGKIGKVSGIGTALNNFKAFSVEGKSNTIQFLAFLSSFSSPSGYCRRSDYRPFSQFVKSNGGRLFLVDTLALVRKLEAQGIPSKHAEAITSTITEVLNDSLENVAQSLVSKGEIQKIEMTQESNLSKFKSEVESSQGHHFSLLQHETEKLRSDIEKMRSELRYEIDKVTAGLRLDLNLERGRIRDELANQNAETTSLTNKLDREIHALRAQLEAAKYDVIKYCIGTLVSISAVGLAVIRILM* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1258 251 Pfam Coiled-coil domain-containing protein 90-like 76 250 IPR024461 -
Vvi4g1258 251 Coils Coil 149 169 - -
Vvi4g1258 251 Gene3D - 77 177 - -
Vvi4g1258 251 PANTHER UNCHARACTERIZED 46 251 IPR024461 -
Vvi4g1258 251 FunFam Coiled-coil domain-containing protein 90-like 77 177 - -
Vvi4g1258 251 Coils Coil 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1258 Vvi-Chr4 19496870 19499987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1258 - - vvi:100242062 472.626