Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1252 ATGGCCAGCGGGAAACTTACCGATGCACCTACTCACAGCTGGTGGCCGCTGCAAAACCAAGATGTTGCACTGCTTTTATCTCGGAAAGTGGCCGACCATTATAGTGCTAGGACCAATCAAACCTTGGAAGAACGAGAAGCAAGTCCAATCATTCATTTGAGGAAACTAAACAACTGGATTAAGAACTGTTGTACACGCTATAATGGTGACATAGACCATCATCAAAGGCGCAAAAAGTTCACATTTCCGGCTCGCCTTATATGTGGAGATTATTTTGAGCTTGCTATGCATTACTCATGGTCTACTGAGGCACCGGCACGACGTGCTTTGGGCCAATGTATTCAGCATTACTTCGTCCAGAAGGCATCTTCATTGGAATGCTGCCAGATGCCAATGTTATCATCAAAAAGCTTAACAAAGGTTCATCAACTATGTTCTGGAGTTTCTTCTAGCATCATTAAACTGGCATGA 471 0.4395 MASGKLTDAPTHSWWPLQNQDVALLLSRKVADHYSARTNQTLEEREASPIIHLRKLNNWIKNCCTRYNGDIDHHQRRKKFTFPARLICGDYFELAMHYSWSTEAPARRALGQCIQHYFVQKASSLECCQMPMLSSKSLTKVHQLCSGVSSSIIKLA* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1252 156 Pfam mRNA capping enzyme 27 62 IPR004971 -
Vvi4g1252 156 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 28 63 IPR039753 GO:0004482
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1252 Vvi-Chr4 19433485 19434260 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1252 K00565 - egr:104450185 130.568