Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1246 ATGAAGGCCCGGCATCACAGTGTGGTTCTTGTGATACTGCTGGGTGTTTTGGTGGCAAATGCTCCGGGTCAAACCCTAGCTTCCAATTCAGTTCCAGCCTTCGTGCAAAACACAATCTACGCCAACAAGATTGCCATTTTCTCCAAATCCTATTGCCCGTATTGCTTGCGGGCAAAGCGCATCTTTAGCGAACTGCATGAGGAACCTTTTGTTGTGGAGCTTGATCATAGAGATGATGGGACTCAAATTCAGAATGTCCTTCTAGATTTGGTGGGTCGAAGCACTGTTCCACAAATATTTGTGAATGGCAAGCATATTGGTGGCTCTGATGACCTCAGAAATGCAGTCCTGAGCGGTCAGCTGCAGAAACAACTCGGTACAAGTTGA 387 0.4703 MKARHHSVVLVILLGVLVANAPGQTLASNSVPAFVQNTIYANKIAIFSKSYCPYCLRAKRIFSELHEEPFVVELDHRDDGTQIQNVLLDLVGRSTVPQIFVNGKHIGGSDDLRNAVLSGQLQKQLGTS* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1246 128 ProSitePatterns Glutaredoxin active site. 46 61 IPR011767 -
Vvi4g1246 128 PANTHER GLUTAREDOXIN 2 25 126 - -
Vvi4g1246 128 Pfam Glutaredoxin 44 106 IPR002109 -
Vvi4g1246 128 NCBIfam glutaredoxin 44 124 IPR011899 -
Vvi4g1246 128 ProSiteProfiles Glutaredoxin domain profile. 32 128 - -
Vvi4g1246 128 FunFam Glutaredoxin 2 26 128 - -
Vvi4g1246 128 CDD GRX_GRXh_1_2_like 43 123 - -
Vvi4g1246 128 Gene3D Glutaredoxin 25 128 - -
Vvi4g1246 128 SUPERFAMILY Thioredoxin-like 33 126 IPR036249 -
Vvi4g1246 128 PRINTS Glutaredoxin signature 44 62 IPR014025 -
Vvi4g1246 128 PRINTS Glutaredoxin signature 103 116 IPR014025 -
Vvi4g1246 128 PRINTS Glutaredoxin signature 89 102 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1246 Vvi-Chr4 19373602 19378071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1246 35 125 Miscellaneous Gene Families AT4G15700 32.967 5.73e-10 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1246 K03676 - vvi:100241967 242.662