Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1245 ATGGCTGTAGGCAAGGCACGTAGTAAGCGTTCGACCTCTGGCTCTTATACGTCAACGGTCACAACAGTAGTTTTTGTAGCCTTGTGTGTCTTGGGTCTATGGATGTTAACCTCCAATTCCATTATTTCTCCTCAAACCACCGCCCGCACCTCCACCACTTCCTCTTTTTCTGCCTCCGGTGAACGCCACCTTTCTAAGCCTAGTGACAGAAGAGATCCTCCTGTATACGAAGACACTGAAGGGGATCTTCCCGATGATGCCATCAAGTCCGATGAGACCAAGCCCTTGCAGGCTACCAACGATGAGGATGACAAGTCTCAGGAAGATAAACTGAAATCCGAGGAAACCCCCAATGTGGAAGCTGGGGAAGAAAACAATGAAAAACAAGAACCTGAGCAGGAAACTAGTGGAGATAACAAGAATGAGGAGGAGAATGCGACTGTTGTTGAAGAGAACCCACCTGAGATACAGAGAAAAGAATCTGCTGAAGAGGAAGAGAAGCAGAAAGAATATGAGACTCAGGCGTCTGAGGAAAGTGCCCTGACTCAGAACCAACTGGCCCAAGGAATCGCTGAGAAAAATTCTGAAGCTGAGGAAACACAGCAAACGAAAGATGAAGAAAGCAATGTAAATCAGGGGGTTGACGAGAATAAATCTGAAGAAAAAAATGGGCTCGAGGCAGAAGTTGAAAAGCGTGAAGCTGAGAGTCAGGAAAACTCGCAAGAATCTCAAAACCAGATTACAGAGGAAGATCAACAACAACGATTACAGCAGCAGCAACAACAAGAGCATCAGCAGAAACAAGAACAGGAAAATTCAGACACCAGGAGTGATGAAACGCTGCAGGAATCATCACAGCCAGAGATTCAAGAGGTAACAAGTCATGAAACCCAACAAAATGAGGAACCCCAACAATCTCAACTCGCATCACAGGACCAAGAATCTTCACAAACAACAGACGAGAAGAAAGCGCAAATTGAAAATAAAAAAACCCAATCAGAATCTAACCAGCAACAGAGAAATTCCAACGAAGAAGCCAAACAGGAGACAACAACTCAAGATAAGGCTCCTTCCTCCAGCTCGACCATTTCTTTCCAGAGCGGGGAAAGCTCTGGGATCCCTATAGAGTCTAAAGAATCAAAGAAGTCCTGGTCAACTCAGGCGGATCAATCCGAGAATCAAAAGGAGAGAAGGAAGGATGGGCCAGATGGGACTATCTATGGCTACACTTGGCAGCTCTGCAATGAAACAGCAGGCCCAGACTATATTCCCTGTTTGGACAACGAGAAAGCAATAATGACATTACATGGTAGGAAACACTACGAGCATCGTGAGAGGCATTGCCCAGAGGAGCCACCCGCATGCCTGGTGCCACTGCCGGAGATGTACAAGTCGCCAGTTGAGTGGCCCCAAAGCAGAGATAAGATATGGTATCACAATGTTCCTCACACCCTTCTGGCAGAGGTGAAGGGGCACCAGAACTGGGTGAAGGTGACTGGGGAGTTCCTCACTTTCCCTGGCGGTGGAACACAATTCATTCACGGAGCCATGCACTACATTGATTTTATTGAAAAAGCGGTACCTGATATTGCATGGGGGAAGCGCACTCGGGTAATATTGGACGTTGGCTGCGGGGTTGCCAGCTTTGGCGGCTATCTTTTCGAAAGAGACGTGCTTACAATGTCTTTTGCACCCAAGGACGAACATGAAGCTCAAGTTCAATTCGCCCTCGAAAGGGGAATACCTGCTATCTCTGCCGTGATGGGATCTCAGCGCCTGCCATTTCCAAGCAGGGTCTTTGATGTTGTGCACTGTGCGCGTTGTAGAGTCCCATGGCATGTAGAAGGTGGTACTCTTCTCTTGGAACTGAACCGGGTTCTGCGTCCTGGAGGTTATTTTGTATGGTCAGCCACCCCTGTATACCAAAAGCTTAAAGAAGATGTTGAGATATGGAAAGAGATGTCAGCACTCACAATGTCCATGTGTTGGGAGCTTGTGAGCATCAACAGGGATAAATTGAATTCTGTAGGTGCTGCCATCTATCGCAAACCTACCTCCAATGTTTGTTATGACCAAAGAAAGCACAAGCGTCCTCCAATGTGTAAAACCGATGATGATCCGAATGCAGCCTGGTATGTGCCTCTGCAGGCATGCATGCATCGGGCACCAGTTGATGGAGCAGAGAGAGGAACACGGTGGCCTGAGGAATGGCCGCGTAGACTGCAGGTAAGTCCATACTGGTTAAACAAAGCGCAGATGGGAATATATGGAAGGCCAGCTCCTGATGATTTCGCATCGGACTATGAACACTGGAAGCGAGTGGTGAACAAGTCTTATCTTAATGGACTGGGCATCAGCTGGTCCAACGTCAGAAACGTCATGGACATGAGAGCTGTTTATGGAGGGTTTGCAGCGGCACTGAAGGACCTCAAGGTGTGGGTCTTAAATGTGGTGAACATAGATTCTCCAGATACACTTCCCATAATCTACGAGCGGGGTCTCTTTGGAATATATCATGACTGGTGCGAATCCTTCAGCACATATCCTCGAACCTATGATCTGCTGCATGCTGATCATCTTTTCTCAAAGCTGAAAAAGAGGTGCAAAATTGCTCCGTTGATGGCAGAGATCGATAGAATAGTGAGACCTGGAGGTAAATTGATTGTGAGAGATGAGTCCAGCGCAATTGGGGAAGTGGAGAACCTGTTGAAATCTCTGCATTGGGAGGTCCATCTAGCCTTCTCCAAAGACCAAGAAGGAATACTCAGCGCACAGAAATCCTATTGGCGGCCAGACATACATGTGGCTTCTTCCTGA 2817 0.4746 MAVGKARSKRSTSGSYTSTVTTVVFVALCVLGLWMLTSNSIISPQTTARTSTTSSFSASGERHLSKPSDRRDPPVYEDTEGDLPDDAIKSDETKPLQATNDEDDKSQEDKLKSEETPNVEAGEENNEKQEPEQETSGDNKNEEENATVVEENPPEIQRKESAEEEEKQKEYETQASEESALTQNQLAQGIAEKNSEAEETQQTKDEESNVNQGVDENKSEEKNGLEAEVEKREAESQENSQESQNQITEEDQQQRLQQQQQQEHQQKQEQENSDTRSDETLQESSQPEIQEVTSHETQQNEEPQQSQLASQDQESSQTTDEKKAQIENKKTQSESNQQQRNSNEEAKQETTTQDKAPSSSSTISFQSGESSGIPIESKESKKSWSTQADQSENQKERRKDGPDGTIYGYTWQLCNETAGPDYIPCLDNEKAIMTLHGRKHYEHRERHCPEEPPACLVPLPEMYKSPVEWPQSRDKIWYHNVPHTLLAEVKGHQNWVKVTGEFLTFPGGGTQFIHGAMHYIDFIEKAVPDIAWGKRTRVILDVGCGVASFGGYLFERDVLTMSFAPKDEHEAQVQFALERGIPAISAVMGSQRLPFPSRVFDVVHCARCRVPWHVEGGTLLLELNRVLRPGGYFVWSATPVYQKLKEDVEIWKEMSALTMSMCWELVSINRDKLNSVGAAIYRKPTSNVCYDQRKHKRPPMCKTDDDPNAAWYVPLQACMHRAPVDGAERGTRWPEEWPRRLQVSPYWLNKAQMGIYGRPAPDDFASDYEHWKRVVNKSYLNGLGISWSNVRNVMDMRAVYGGFAAALKDLKVWVLNVVNIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKLKKRCKIAPLMAEIDRIVRPGGKLIVRDESSAIGEVENLLKSLHWEVHLAFSKDQEGILSAQKSYWRPDIHVASS* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1245 938 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 421 926 IPR004159 GO:0008168
Vvi4g1245 938 MobiDBLite consensus disorder prediction 63 174 - -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 330 390 - -
Vvi4g1245 938 Coils Coil 190 210 - -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 239 266 - -
Vvi4g1245 938 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 756 903 IPR029063 -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 197 238 - -
Vvi4g1245 938 Gene3D Vaccinia Virus protein VP39 514 672 IPR029063 -
Vvi4g1245 938 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 22 930 IPR004159 GO:0008168
Vvi4g1245 938 Coils Coil 321 349 - -
Vvi4g1245 938 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 444 663 IPR029063 -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 45 404 - -
Vvi4g1245 938 FunFam probable methyltransferase PMT23 511 695 - -
Vvi4g1245 938 Coils Coil 215 273 - -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 175 196 - -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 279 315 - -
Vvi4g1245 938 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1245 Vvi-Chr4 19369409 19372899 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1245 - - vvi:100255843 1800.02