Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1237 ATGGACTCTAATGCAGATCCTGAGGATCATATGATGATCGAAAGAAGTGTTTCACAAATGATGCAAATTGACCCAAGACGAGCTCGGTTTCCATGCTGCATTGTGTGGACCCCTCTTCCTGTCATATCATGGCTGATTCCTTTCGTTGGCCACATTGGCATATGCAGAGAGGATGGGGTAATCTTGGACTTTGCAGGGCCCAATTTTGTCTGTGTAGATAATTTTGCCTTTGGAGCAGTGACCCGTTATATCCAAATTAGCAAAGAAAAGTGCTGCATTTCTCCTCATCATCCTGCTCCATACAGAAGAGAGAATGGACGTGGACAGGATGAAACTGAGATAGACATATTGACATGGGATGATGCACTGCGGAAGAGCACACAGGAATTCCAACACCAATCTTACAACCTTTTTACTTGCAACTGCCACTCCTTTGTGGCAAACAATCTGAACAGATTGGGCTTTTATGATGGTGGTTGGAATGTGGTGAATCTTGCAGCTCTCATTTTCCTCAAAGGTCGCTGGGTGAGCACAACATCTATGATAAAATCTTTCTTACCATTTGCCATAGTGTCCGCTCTTGGACTGTTCTTTGGGGGCTTGACCTTCTTAACTTTCTTGGCTTTCTTCACCTTCCTTCTTGTTGGATGGTTCCTTCTCGGTACTTACTGTTTCAAGAATTTGATCCACTTGTAG 696 0.4382 MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGVILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWDDALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTSMIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1237 231 PANTHER UNCHARACTERIZED 8 229 IPR008496 -
Vvi4g1237 231 Pfam Protein of unknown function (DUF778) 39 88 IPR008496 -
Vvi4g1237 231 Pfam Protein of unknown function (DUF778) 89 175 IPR008496 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1237 Vvi-Chr4 19254503 19255701 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1237 K20726 - vvi:100259075 462.996