Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1220 ATGGGGACTGCTCTCTACAAATTCAAAGCGTTTAGTGTGGAGGGGAAATCGAATACCACTTCTGTTTCTTCGCCTTTTGGATATTGCAGAAGATCTGATTATCGGCCGTTTTCTCAGTTCGTGAAGTCTAGTGGAGGGCGATTGTTCCCGGTTGACACATTGGCTCAGAAAAGTTATATGATTCAAGAATGTAATTTCTATTACTTAAGCATAGAGTTTAATCTGGATGGAATTCGAGAATTGCTAATGACATCTACCAAAACTGAAGTCTTGACTGACAGTTTGGAGAATGTGGCTCAGTCCTTGGTTTCTAAGGGCGAAATACAGAAAATTGAAATGACTCAAGAATCCAATTTGTCCAAATTCAAATCTGAAGTTGAAAGCTCTCAGGGACATCATTTTTCTCTCTTGCAACATGAAACTAAGAAACTTCAAAGTGATATGGAAAAAATGCATAATAAGCTAAGGTATGAAACTGATGACGTCACTATAGCGATAAGGGCTGAGTTCGCATATCATAAGGCAAAAACCGATCACATGTACAACAAACTAGATCGGGGAATTCATGCACTAAGTGCTGAGATAGAAGCTACAAAGTATGATGTGATAAAATATTTCATAGGTACCATTGTTTATATTTCAACTGTGGGTGTTGCTGTGATTTTTAGGGCATTGCAAAAGGGGCATGATCATGAACCTTGA 702 0.3832 MGTALYKFKAFSVEGKSNTTSVSSPFGYCRRSDYRPFSQFVKSSGGRLFPVDTLAQKSYMIQECNFYYLSIEFNLDGIRELLMTSTKTEVLTDSLENVAQSLVSKGEIQKIEMTQESNLSKFKSEVESSQGHHFSLLQHETKKLQSDMEKMHNKLRYETDDVTIAIRAEFAYHKAKTDHMYNKLDRGIHALSAEIEATKYDVIKYFIGTIVYISTVGVAVIFRALQKGHDHEP* 234
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1220 233 Pfam Coiled-coil domain-containing protein 90-like 82 224 IPR024461 -
Vvi4g1220 233 Gene3D - 80 162 - -
Vvi4g1220 233 PANTHER UNCHARACTERIZED 28 224 IPR024461 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1220 Vvi-Chr4 19107543 19110307 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1220 - - vvi:100247201 264.618