Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1213 ATGGCATATCAGCAAGATCCATGCGCCAACCCAACGCATCAGACTGGCAAGACCGGAGGCCAGACCGACCAGTATGGAAACCCAGTCCATCAAACCGAGGCCATGGGCGCGTATGGTGCGGGAACTGGCACTGGTATGCATGGTGGGGAGCATCAGCAGCAGCCCCACCAACAACCCGGCGTGCTTCATCGCTCCGGCAGCTCTTCATCCGAGGACGATGGGCAAGGTGGGAGAAGGAAGAAAGGGATGAAGGAGAAGATAAAAGAGAGGATACCGGGCATGGGACGCAAGGACGAGCAGAAGCATACGAGCGCCACAAGTACGCCGGGGCAGGGGCAGCAACAGAAAGGAATGATGGAGAAGATCAAGGAGAAGCTGCCTGGGGGCCACTAG 393 0.5827 MAYQQDPCANPTHQTGKTGGQTDQYGNPVHQTEAMGAYGAGTGTGMHGGEHQQQPHQQPGVLHRSGSSSSEDDGQGGRRKKGMKEKIKERIPGMGRKDEQKHTSATSTPGQGQQQKGMMEKIKEKLPGGH* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1213 130 Pfam Dehydrin 15 130 IPR000167 GO:0009415
Vvi4g1213 130 MobiDBLite consensus disorder prediction 47 72 - -
Vvi4g1213 130 MobiDBLite consensus disorder prediction 73 103 - -
Vvi4g1213 130 MobiDBLite consensus disorder prediction 1 29 - -
Vvi4g1213 130 MobiDBLite consensus disorder prediction 1 130 - -
Vvi4g1213 130 ProSitePatterns Dehydrins signature 2. 121 128 IPR030513 -
Vvi4g1213 130 PANTHER DEHYDRIN XERO 2-RELATED 1 130 IPR000167 GO:0009415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1213 - - vri:117913115 205.297