Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1197 ATGGCTCAGAGGACCGTCTTGAAGGTTGATATTTGGTGCCCAAAATGCCAGAAGAAGCTCCTCCAAGCAGTCTCCGGATTAGAAGGTGTGAATACAATTGACATTGACGCAACCAAAGGTTTATTGACAGTAACCGGTGAGGCAGACCCTTATGAAGTTATAGTTCGTGCTAGGAAGGCTTGCAAACACGCTGAAGTGGTGACTATTGGGCCTCCACCTGCTCCCGAAAAGAAGCCCGAAAAAGAGAAGCCCGAAAAAGAGAAGCCCGATAAAAAGGTCCCCTCGTCTGACAACTGCCGTATGTGTCAGCGTTTTGCTGTCATCCATTTAGACCAGTGGGACGAGCCCAATGTTACATGCTCTATCCTGTAA 372 0.4812 MAQRTVLKVDIWCPKCQKKLLQAVSGLEGVNTIDIDATKGLLTVTGEADPYEVIVRARKACKHAEVVTIGPPPAPEKKPEKEKPEKEKPDKKVPSSDNCRMCQRFAVIHLDQWDEPNVTCSIL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1197 123 Pfam Heavy-metal-associated domain 8 57 IPR006121 GO:0046872
Vvi4g1197 123 ProSiteProfiles Heavy-metal-associated domain profile. 2 69 IPR006121 GO:0046872
Vvi4g1197 123 SUPERFAMILY HMA, heavy metal-associated domain 2 66 IPR036163 GO:0046872
Vvi4g1197 123 MobiDBLite consensus disorder prediction 66 97 - -
Vvi4g1197 123 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 4 92 - -
Vvi4g1197 123 Gene3D - 1 72 - -
Vvi4g1197 123 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1197 Vvi-Chr4 18876547 18877079 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1197 - - vvi:104879155 214.927