Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1193 ATGGACTATGCTGTGGAAGAAATCACAAAGGGAGTGAACAACATGAACATTGCAGATTCTCACAAGAAGAATCAGATTCAGGTCTCTAACACCAAGAAGCCCTTGTTTTTCTATGTTAATCTCGCCAAAAGGCACATGCAGCAGCACAACGAGGTGGAACTCTCTGCCCTAGGAATGGCTATTGCTACTGTTGTTACCATTGCTGAAATTCTAAAAAACAATGGATTGGTTGTCGAGAAAAAGATCATGACATCTACTGTTGATATGAAAGATGAATCAAGAGGTCGACCTATCCAAAAAACCAAGATCGAGATATTGTTGGGGAAGACTGAGAACTTTGACGAACTAATGGCAGCTGCAGCAGAAGAGAAATGGAGGAAAATGGCCACGATAGTGGCGATGGTAGTCATTGGTGGTGGGCTCTGGCAAGCGCCGCCTAATTAG 444 0.4347 MDYAVEEITKGVNNMNIADSHKKNQIQVSNTKKPLFFYVNLAKRHMQQHNEVELSALGMAIATVVTIAEILKNNGLVVEKKIMTSTVDMKDESRGRPIQKTKIEILLGKTENFDELMAAAAEEKWRKMATIVAMVVIGGGLWQAPPN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1193 147 Pfam Alba 24 78 IPR002775 GO:0003676
Vvi4g1193 147 SUPERFAMILY AlbA-like 23 118 IPR036882 GO:0003676
Vvi4g1193 147 Gene3D - 22 131 IPR036882 GO:0003676
Vvi4g1193 147 FunFam Uncharacterized protein At2g34160 22 133 - -
Vvi4g1193 147 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 5 124 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1193 Vvi-Chr4 18830939 18831569 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1193 - - vvi:100268144 219.935