Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1192 ATGTTTTGTAATCGGAGTTCCAGGTTCTTTCTACGGCAGGCTCTTCCCCAGCAAAAATCTTCATTTTGTCCATTCTTCTTCCAGTCTCCATTGGTTGTCCATTATTTGAGACTGGAGAGTAATAAAGGGAACATTTACATGGCAAGTTCGAGCCCACCAAGAGTGCTTAAAGCATACTATGAGCAATTCCAAAGAGATTTCTCCATGTTTCTCAGGTGTCGGTCGGAGGAACTATTAGAAGGAGGAAGTATGGTTTTAACATTTTTAGGAAGAAGAAGTGACAATCCCTCTAGCAAGGAATGTTGCTACATCTGGGAGCTCTTAGCTGTAGCTCTCAACGATATGGTGGCAGAGGGGCTCATTGACGAGGAGAAAATGGATTCCTTCAATATTCCTCAATATGCACCATCCCCAACTGAAGTGAAATGTGAGGTTGAAAAGGAAGGATCCTTTACCATAAATAGGCTAGAGGTTTCTGAAGTGAACTGGAATGCATATCGCGCCATTGCTTGTAAGCCACTTCGGTGA 528 0.4299 MFCNRSSRFFLRQALPQQKSSFCPFFFQSPLVVHYLRLESNKGNIYMASSSPPRVLKAYYEQFQRDFSMFLRCRSEELLEGGSMVLTFLGRRSDNPSSKECCYIWELLAVALNDMVAEGLIDEEKMDSFNIPQYAPSPTEVKCEVEKEGSFTINRLEVSEVNWNAYRAIACKPLR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1192 175 Gene3D Vaccinia Virus protein VP39 59 162 IPR029063 -
Vvi4g1192 175 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 167 IPR029063 -
Vvi4g1192 175 Pfam SAM dependent carboxyl methyltransferase 37 165 IPR005299 GO:0008168
Vvi4g1192 175 Gene3D - 37 167 IPR042086 -
Vvi4g1192 175 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 165 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1192 Vvi-Chr4 18815425 18816172 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1192 K21483 - vvi:100253073 248.44