Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1189 ATGGTGCAGAAAAAAGTAATATCCTTGACAAAGCCCATAATCGAGGAAGCCATAACAAATCTTTACTGCAACAAATTTCCGACCAGCCTATGCATCGCAGACTTGGGATGTTCTTCTGGACCCAACACTTTGTTTGCGGTCTTGGAAGTTGTCACTACAGTGGACAGGGTGGGCAAGAAAATGGGGCGTCAATTGCCCGAAATTCAAGTGTTTTTGAATGATCTGCCGGGGAATGATTTCAACACCATTTTCAAATCCTTGCCCAGGTTCCAAAAGGATCTTGAGAAAAGAATGGGAGCAGGAGCTGAATCATGTTTCATAAACGGAGTTCCAGGTTCTTTCTACGGCAGGCTGTTCCCCAGCAAAAGTCTTCATTTTATCCATTCTTCTTACAGTCTCCAATGGTTGTCTCAGGTTCCTCAAGGGCTGGAGAGTAACAAAGGGAACATTTATATGGCAAGTTCGAGCCCACCATGCGTGCTTAAAGTATACTATGAGCAATTCCGAACCGATTTCTCCATGTTCCTCAGGTGTCGGTCGGAGGAACTTCTAGAAGGAGGGAGTATGGTTTTAACATTTTTAGGAAGAAGAAGTGAAGATCCCTCTAGCAAAGAATGTTGCTACATTTGGGAGCTCTTAGCTGTGGCTCTCAACGATATGGTGGCAGAGGGGCTCATAGAGGAGGAAAAAATGGATTCCTTCAATATTCCTCAATATACACCATCCCCAGCTGAAGTAAAATGTGAGGTTGAAAAGGAAGGATCCTTTACCATAAGTAAGCTGGAGGTTTCTGAAGTTAACTGGAACGCGTATCACGGTGAATTCTGCCCATCAGATGCTCATAAAGATGGTGGGTACAATGTGGCTAAGTTGATGAGAGCAGTGGCGGAGCCATTGCTTGTAAGCCATTTCGGTGATGGAATAATAGAGGAAGTGTTCAGCAGGTACCAAAAGATTGTGGCTGATCGCATGTCCAGAGAGAAGACTGAGTTCGTAAATGTCACTGTCTCCATGACTAAGCGTGGATAA 1029 0.4441 MVQKKVISLTKPIIEEAITNLYCNKFPTSLCIADLGCSSGPNTLFAVLEVVTTVDRVGKKMGRQLPEIQVFLNDLPGNDFNTIFKSLPRFQKDLEKRMGAGAESCFINGVPGSFYGRLFPSKSLHFIHSSYSLQWLSQVPQGLESNKGNIYMASSSPPCVLKVYYEQFRTDFSMFLRCRSEELLEGGSMVLTFLGRRSEDPSSKECCYIWELLAVALNDMVAEGLIEEEKMDSFNIPQYTPSPAEVKCEVEKEGSFTISKLEVSEVNWNAYHGEFCPSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFSRYQKIVADRMSREKTEFVNVTVSMTKRG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1189 342 Gene3D - 138 327 IPR042086 -
Vvi4g1189 342 Gene3D Vaccinia Virus protein VP39 2 329 IPR029063 -
Vvi4g1189 342 Pfam SAM dependent carboxyl methyltransferase 16 340 IPR005299 GO:0008168
Vvi4g1189 342 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 2 328 IPR005299 GO:0008168
Vvi4g1189 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 341 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1189 Vvi-Chr4 18778206 18779425 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1189 K21483 - vvi:100258209 691.804