Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1188 ATGGAAGTAGTGCAAGTGCTTTGCATGAAGGGAGGAAATGGGGATACCAGTTACGCACAAAACTCACTACTTCAGAAAAAAGTAATATCCTTGACAAAGCCCATAACCGACGAAGCAATATCAAATCTCTTCTGCAACAACTTTCCGGCCAGGCTATGTATCGCAGACTTGGGTTGTTCTTCTGGACCCAACACTTTGTTTGCAGTCTTGGAATTCGTCACTACAGTGGACAAGGTGCACAAGAAAATGGGGCATGAATTGCCCGAAATTCAAGTGTTTTTGAATGATCTGCCGGGGAATGATTTCAACACCATTTTCAAATCCTTGCCCACTTTCCAAAAAGATCTTCAGAAAACAATGGGAGCAGGCGCTGAATCATGTTTTGTAACCGGAGTTCCAGGTTCTTTCTACGGCAGGCTCTTCCTGGGCAAAAGTCTTCATTTTGTCCATTCTTCTTACAGTCTCCAATGGCTGTCTCAGGTTCCTCGAGGACTGGAGAGTAACAAAGGGAACATTTACATGGCAAGTTCGAGCCCACCAAGCGTGCTTAAAGCATACTATGAGCAATTCCAAACCGATTTCTCCATGTTCCTCAGGTGTCGGTCTGAGGAACTACTGGAAGGAGGGAGTATGGTTTTAACATTTTTAGGAAGAATAAGTGAAGATCCCTCTAGCAAAGAATGTTGCTACATTTGGGAGCTCTTAGCTGTGGCTCTCAACGATATGGTGGCAGAGGTGCACATTCAATTCATACAAGCCTTAATGTTGCCAAGTTGTATAGATTAA 786 0.4377 MEVVQVLCMKGGNGDTSYAQNSLLQKKVISLTKPITDEAISNLFCNNFPARLCIADLGCSSGPNTLFAVLEFVTTVDKVHKKMGHELPEIQVFLNDLPGNDFNTIFKSLPTFQKDLQKTMGAGAESCFVTGVPGSFYGRLFLGKSLHFVHSSYSLQWLSQVPRGLESNKGNIYMASSSPPSVLKAYYEQFQTDFSMFLRCRSEELLEGGSMVLTFLGRISEDPSSKECCYIWELLAVALNDMVAEVHIQFIQALMLPSCID* 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1188 261 Gene3D Vaccinia Virus protein VP39 21 219 IPR029063 -
Vvi4g1188 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 245 IPR029063 -
Vvi4g1188 261 Pfam SAM dependent carboxyl methyltransferase 38 248 IPR005299 GO:0008168
Vvi4g1188 261 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 245 IPR005299 GO:0008168
Vvi4g1188 261 Gene3D - 6 248 IPR042086 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1188 Vvi-Chr4 18771795 18772890 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1188 K21483 - vvi:100253073 498.049