Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1186 ATGGGAGCAGGCGCTGAATCATGTTTTGTAACCGGAGTTCCAGGCTCTTTCTACGGCAGGCTCTTCCCCAGCAAAAGTCTTCATTTTGTCCATTCTTCTTACAGTCTCCAATGGTTGTCTCAGGTTCCTCGAGGGCTGGAGAGTAACAAAGGGAATATTTACATGGCCAGTTGGAGCCCACCAAGCGTGCTTAAAGCATACTATGAGCAATTCCAAGGCGATTTCTCCATGTTTCTCAGGTGTCGGTCGGAGGAACTACTAGGAGGAGGGACTGTGGTTTTAACATTTTTAGGAAGAAGAAGTGAAGATCCCTCTAGCAAAGAATGTTGCTATATCTGGGAGCTCTTAGCTGTGGCTCTCAATGATATGGTTTCAGAGGGGCTCATAGATGAGGAGAAGATGGATTCCTTCAATATTCCTCAATATACACCTTCCCCAGCTGAAGTAAAATGTGAGGTTGAAAAGGAAGGATCCTACACCATAAATCGGCTGGAGGTTTCTGAAGTGAACTGGAATGCGTACCACGGTGAATTCTGCCCATCAGATGCTCATAAAGATGGTGGATACAACGTGGCCAAGTTGATGAGAGCAGTTGCAGAGCCATTGCTTGTAAGCCACTTCGGTGACGGAATAATAGAGGAAGTGTTCGGCAGGTACAAAAAGATTGTTGCTGATCGCATGACCAGAGAGAAGACTGAATTCGTAAATGTCACGGTTTTCATGACTAAGCGTGGATGA 738 0.458 MGAGAESCFVTGVPGSFYGRLFPSKSLHFVHSSYSLQWLSQVPRGLESNKGNIYMASWSPPSVLKAYYEQFQGDFSMFLRCRSEELLGGGTVVLTFLGRRSEDPSSKECCYIWELLAVALNDMVSEGLIDEEKMDSFNIPQYTPSPAEVKCEVEKEGSYTINRLEVSEVNWNAYHGEFCPSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFGRYKKIVADRMTREKTEFVNVTVFMTKRG* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1186 245 Pfam SAM dependent carboxyl methyltransferase 6 243 IPR005299 GO:0008168
Vvi4g1186 245 Gene3D - 41 230 IPR042086 -
Vvi4g1186 245 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 7 230 IPR005299 GO:0008168
Vvi4g1186 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 244 IPR029063 -
Vvi4g1186 245 Gene3D Vaccinia Virus protein VP39 6 232 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1186 Vvi-Chr4 18747798 18748758 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1186 K21483 - vvi:100242722 472.241