Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1183 ATGGAAGTAGCTCAAGTGCTTTGCATGAAGGGAGGAAATGGGGACACCAGTTACGCAAAAAACTCATTAGTTCAGAAAAAAGTAATATCCTTGACAAAGCCTATAATCGAGGACGCCATAACAAATCTCTACTGCAACAACTTCCCGGCCAGCCTATGCATCGCAGACTTGGGCTGTTCTTCTGGACCCAACACTTTTTTTGCAGTCTTGGAAGTTGTCACTACAGTGGACAAGGTGGGGAAGAAAATGGGGCGTCAATTGCCCGAAATTCAAGTGTTTTTGAATGATCTGCCGGGAAATGATTTCAACACCATTTTCAAATCCTTGCCCAAGTTCCAAAAAGATCTTCAGAAAACAATGGGAGCAGGCGCTGAATCATGTTTTGTAACCGGAGTTCCAGGCTCTTTCTACGGCAGGCTCTTCCCCAGCAAAAGTCTCCATTTTGTCCATTCTTCTTATAGTCTCCAATGGTTGTCTCAGGTTCCTCGAGGGCTGGAGAACAAAGGGAATATTTACATGGCCAGTTCGAGCCCACCAAGCGTGCTTAAAGCATACTATGAGCAATTCCAAAGCGATTTCTCCATGTTTCTCAGGTGTCGGTCGGAGGAACTACTAGGAGGAGGGACTATGGTTTTAACATTTTTAGGAAGAAGAAGTGAAGATCCCTCTAGCAAAGAATGTTGCTATATCTGGGAGCTCTTAGCTGTGGCTCTCAATGATATGGTTTCAGAGGGGCTCATAGATGAGGAGAAGATGGATTCCTTCAATATTCCTCAATATACACCTTCCCCAGCTGAAGTAAAATGTGAGGTTGAAAAGGAAGGATCCTTCACCATAAATCGGCTGGAGGTTTCTGAAGTGAACTGGAATGCGTACCACGGTGAATTCTGCCCATCAGATGCTCATAAAGATGGTGGATACAACGTGGCCAAGTTGATGAGAGCAGTTGCAGAGCCATTGCTTGTAAGCCACTTCGGTGATGGAATAATAGAGGAAGTGTTCTGCAGGTACAAAAAGATTGTTGCTGATCGCATGTCCAGAGAGAAGACTGAATTCGTAAATGTCACGGTTTCCATGACTAAGCGTGGATGA 1092 0.4469 MEVAQVLCMKGGNGDTSYAKNSLVQKKVISLTKPIIEDAITNLYCNNFPASLCIADLGCSSGPNTFFAVLEVVTTVDKVGKKMGRQLPEIQVFLNDLPGNDFNTIFKSLPKFQKDLQKTMGAGAESCFVTGVPGSFYGRLFPSKSLHFVHSSYSLQWLSQVPRGLENKGNIYMASSSPPSVLKAYYEQFQSDFSMFLRCRSEELLGGGTMVLTFLGRRSEDPSSKECCYIWELLAVALNDMVSEGLIDEEKMDSFNIPQYTPSPAEVKCEVEKEGSFTINRLEVSEVNWNAYHGEFCPSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFCRYKKIVADRMSREKTEFVNVTVSMTKRG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1183 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 362 IPR029063 -
Vvi4g1183 363 Pfam SAM dependent carboxyl methyltransferase 39 361 IPR005299 GO:0008168
Vvi4g1183 363 Gene3D Vaccinia Virus protein VP39 21 350 IPR029063 -
Vvi4g1183 363 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 349 IPR005299 GO:0008168
Vvi4g1183 363 Gene3D - 6 348 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1183 Vvi-Chr4 18723210 18724761 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1183 K21483 - vvi:100242722 737.643