Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1182 ATGGAATTAGTTCAAGTGCTTCACATGAAGGAAGGAGTTGGAGATGCTAGTTATGCAAACAACTCAGGACTTCAGAAAACAGTGATATCTAAGGCAAAGCACGTAGCGGAGAAAGCCATAACCAATCTCTATTGTAGCATCATGCCGCAATGCTTAGGCATAGCCGAGTTAGGTTGTTCTTCTGGACCCAATGCTCTATTTGTCATCCTAGAACTTGTGAGCACAGCCTACAAAGCCTGTCAGAAACTAGGTCGTCAGTTGCCGGAAATTCAAGTGTTCCTCAATGATCTTCCAGGAAATGATTTCAACACTCTCTTCAAAACCGTCACAAAATTTCAGCAAAATCTGTCACAAGAGATGGGCAATGGTGTTGGACCATGTTATTTCATGGGAGTTCCGGGTTCTTTCTATGGCAGGCTTTTCCCTAACCGAAGTCTACATTTTGTCCATTCTTCTTACAGCGTGCATTGGCTGTCTCAGGTTCCTCCAGGGTTAGAGGACAATAAAGGGAATATTTTCATGTCAAGTTCAAGCCCACCAAGCGCGCTTATGGCTTACTATGCACAGTTCCAAAAGGATTTCTCGGTGTTCCTCAAGCATCGCGCAGAGGAAATAGTTGAAGGAGGGCGTATGGTTATCACAATCATGGGGAGAAGAAGTGAAGATCCTACCAGTAAAGAGTGTTGTTACAGTTGGGAGCTTTTGGCTTTGGCTCTCAGAGATATGGTCTCAGAGGGGCTCATAGAAGAAGAAAAATTGGATTCCTTCAACATTCCTCAATACACACCATCTCCTACTGAAATGAAGCTTGAGATTGAAAAGGACGGATCATTTGTCATAGACCAGCTAGAGGTTTTTGAAGTGGACTGGGATTGTTACGAAAGTGATGGTCCTTGTAATGCTGCAAAGTGTATGAGAGCGGTGGCAGAATCAATGTTTGCTGCTCACTTTGGTAGTGGGATCATAGAAGAGGTGTTCCGTAGGCATAGAGAGATTGTTGTTGATCGCATGTCCAAGGAGAAGCCTCAGTATGTCAATTTGGTTGTTTCCATGACTAGAAATGGATGA 1068 0.4373 MELVQVLHMKEGVGDASYANNSGLQKTVISKAKHVAEKAITNLYCSIMPQCLGIAELGCSSGPNALFVILELVSTAYKACQKLGRQLPEIQVFLNDLPGNDFNTLFKTVTKFQQNLSQEMGNGVGPCYFMGVPGSFYGRLFPNRSLHFVHSSYSVHWLSQVPPGLEDNKGNIFMSSSSPPSALMAYYAQFQKDFSVFLKHRAEEIVEGGRMVITIMGRRSEDPTSKECCYSWELLALALRDMVSEGLIEEEKLDSFNIPQYTPSPTEMKLEIEKDGSFVIDQLEVFEVDWDCYESDGPCNAAKCMRAVAESMFAAHFGSGIIEEVFRRHREIVVDRMSKEKPQYVNLVVSMTRNG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1182 355 Gene3D - 6 340 IPR042086 -
Vvi4g1182 355 Gene3D Vaccinia Virus protein VP39 21 341 IPR029063 -
Vvi4g1182 355 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 340 IPR005299 GO:0008168
Vvi4g1182 355 Pfam SAM dependent carboxyl methyltransferase 39 353 IPR005299 GO:0008168
Vvi4g1182 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 353 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1182 Vvi-Chr4 18715839 18719071 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1182 K21483 - vvi:100265009 716.842