Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1181 ATGGTAGCCATAAACTTTCTTCACGTGAATGCAGGAAATGGAGAAATTAGCTATGCTAATAACTCACTCGCCCAAAAAAAAATTATATTGAAGGCAAGGGCATTTCTTGAGGAGGCCATCAGAGATAGGTTCGTCTCAGCAGGCTTTCCCAGCTGTGTTAAACTAGCAGAATTGGGTTGCTCTTCAGGAACAAACGCCCTTTTGGCCATCTCCGAAATTATTGACACCATTCATGAAATGTCCCAAAGGATTAATTGTGAGTCTCCGGAGTTCCAAGTGTTCCTCAATGATCTTCCAGAAACTGACTTTAACAACATTTTCAAATCGTTGCCTGCTTTCTATGAGGGGCTGATGAAAGAAAAGGGAGGCAAACTGGGGAATTGCTTTGTGACAGGAATGCCAGGTTCTTTCTACGGGAGGATCTTTCCCACAAGGAGCCTAGATTTTGTCCATTCTTCTGCAAGTGTTCATTGGTTGTCTCAGGTTCCTGCTGGACTAAAAAATAACAAAGGACACATATATATGGCAAACACATGTCGTCCCGATGTTCTTAAAGCCTACACGAAACAGTTTCAGAGGGACTTCACAATGTTTCTAGGGTTGCGGTCTGAGGAAATTAAACCTGGAGGGCGTATGGTTATTACTATAACAGGAAGGAGCATTGAAGATCCCTCTAGCAAAGATTGTTGTGACCTTTGGGAGCTGTTAGCAAAATCACTCCTCGACATGTTGGCTGATGGACTTGTTGAGGAGGCGGATGTGGACTCGTTCAACCTTCCTATGTACAATCCCTTTGAGGGTGAAGTGAAGGCTTTAATTGAAGAGGAGGGGTCTTTCAATCTTGATAAGCTAGAAACTTTCGAAGCCAGTTGGGACCCCTATGATGACAGTGACAAGACTAGGAGCGGACAAAATGTAGCAAATTGTATAAGGAGTGCTACAGAGCCCATGTTGGCTACTCATTTTGGAGATGCCATAATCCCTGATCTATTTGCAAGGTATGCAAACCGCGTCGCTGAGCATCTCTCAATGGAAAAGGGACATCACTTCCTCGTAGTGTTTTCTTTGACAAAGAAGTAA 1080 0.4352 MVAINFLHVNAGNGEISYANNSLAQKKIILKARAFLEEAIRDRFVSAGFPSCVKLAELGCSSGTNALLAISEIIDTIHEMSQRINCESPEFQVFLNDLPETDFNNIFKSLPAFYEGLMKEKGGKLGNCFVTGMPGSFYGRIFPTRSLDFVHSSASVHWLSQVPAGLKNNKGHIYMANTCRPDVLKAYTKQFQRDFTMFLGLRSEEIKPGGRMVITITGRSIEDPSSKDCCDLWELLAKSLLDMLADGLVEEADVDSFNLPMYNPFEGEVKALIEEEGSFNLDKLETFEASWDPYDDSDKTRSGQNVANCIRSATEPMLATHFGDAIIPDLFARYANRVAEHLSMEKGHHFLVVFSLTKK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1181 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 359 IPR029063 -
Vvi4g1181 359 Gene3D Vaccinia Virus protein VP39 21 346 IPR029063 -
Vvi4g1181 359 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 344 IPR005299 GO:0008168
Vvi4g1181 359 Gene3D - 7 345 IPR042086 -
Vvi4g1181 359 Pfam SAM dependent carboxyl methyltransferase 39 358 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1181 Vvi-Chr4 18694277 18695703 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1181 K21482 K21483 vvi:100249594 719.153