Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1179 ATGTCAAAAAGAATGAATTGCAAGTCGCCCGAGTTCCAAGTGTTTCTGAATGATCTTCCGGGAAATGACTTCAACAACATTTTCAGTTTGCTGCCGGATTTCAATGAGAAGCTGACAAAGGAGGAGGACGACACACTGGGGCATTGTTTCATAACGGGAGTACCAGGTTCTTTCTACAGCAGGATTTTTCCGAGCAGGAGCCTAGATTTTGTTCACTCTTCTTGTAGCGTTCACTGGCTGTCTCAGGCTCCAGCTGGGCTAGAAAAGAACAAGGGACATATATACATTGCCAATGGAAGCCCTCCCACCGTCATCCAAGCATACACAAACCAATTTCAGAGGGATTTCTCATTATTTTTAGGCTTGCGCTCCGAGGAAATAAAACTTGCAGGGCGTATGGTTATTACGATAATAGGCAGGAGTATGGAAGATCCCTCTGGCGGAGAATGTTGTGACCTTTGGGAGCTGCTAGCCGAATCTCTCACCGACATGTTGGCGGAGGGGCTGATTGAAGAGGCTGATTTGAATTCGTTCAATATTCCTATATATTATCCCTCTGAGGGTGAAGTCAGGGCTGTGGTTCAAGAAGAAGGGTCCTTCAATCTTGATAAGATTGAAAGTTTTGAAGCCAATTGGGACCCCTTTGATGACAGCGACAAGTATAGAGAAGCACAAAACGTGGCAAATTATGTAAGGAGTATTACAGAGCCCACCTTGAAGAGTCATTTTGGAGGCGCTGTAATTGGAAATTTATTTGGAAGGTATGCGGATCATCTGGCCAAGCATCTTTTGATGGAGAAGGGAAAATACTTTTTCATGGTCATTTCCCTGACAAAGAAATAA 843 0.4413 MSKRMNCKSPEFQVFLNDLPGNDFNNIFSLLPDFNEKLTKEEDDTLGHCFITGVPGSFYSRIFPSRSLDFVHSSCSVHWLSQAPAGLEKNKGHIYIANGSPPTVIQAYTNQFQRDFSLFLGLRSEEIKLAGRMVITIIGRSMEDPSGGECCDLWELLAESLTDMLAEGLIEEADLNSFNIPIYYPSEGEVRAVVQEEGSFNLDKIESFEANWDPFDDSDKYREAQNVANYVRSITEPTLKSHFGGAVIGNLFGRYADHLAKHLLMEKGKYFFMVISLTKK* 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1179 280 Gene3D Vaccinia Virus protein VP39 4 267 IPR029063 -
Vvi4g1179 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 280 IPR029063 -
Vvi4g1179 280 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 6 264 IPR005299 GO:0008168
Vvi4g1179 280 Pfam SAM dependent carboxyl methyltransferase 3 279 IPR005299 GO:0008168
Vvi4g1179 280 Gene3D - 82 266 IPR042086 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1179 Vvi-Chr4 18678666 18680051 Dispersed/Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1179 - - vvi:100266757 574.318