Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1176 ATGGATAAGGAAATGAAGAATCAGAAACGGTGTAGAGGTTCGGAACCAGACTTTTTGTTAAGGTGGGGAAACAGGAAGGGACTTAGATGTTTGAAAGTCAAAAATGGAAGAAACGTTGCAGATAAATCAGACTATTTGGGTAGCAAGAAAATCACCTCTCGTGTTGATCGTTGCGTTGTCACTGCCGAGAAGGAGACTCCCTCTCCACAAACCCATCGTCTGAATAGTTTGCTGCCGGATTTCTATGAGAAGCTGACAAAAGAGGAGGACGGCACACTGGGGAATTGCTTCATAACGGGAGTGCCAGGTTCTTTCTACAGCAGGATTTTTCCGAGCAGGAGCCTAGATTTTGTTCACTCTTCTTGTAGCGTTCACTGGCTGTCTCAGGCTCCAGCTGGGCTAGAAAAGAACAAGGGACATATATACATTGCCAATGGAAGCCCTCCCACCGTCATCGAAGCATACACAAACCAATTTCAGAGGGATTTCTCATTATTTTTAGGCTTACGCTCTGAGGAAATCAAACCTGGAGGGTGTATGGTTATTACGATAATCGGCAGGAATATGGAAGATCCCTCTAGCGGAGATTGTTGTGACCTTTGGGAGCTGCTAGCCAAATCTCTCCTCGACATGTTGGCGGAGGTCAGCTTACTTACTCTCTTCTACTAA 669 0.4559 MDKEMKNQKRCRGSEPDFLLRWGNRKGLRCLKVKNGRNVADKSDYLGSKKITSRVDRCVVTAEKETPSPQTHRLNSLLPDFYEKLTKEEDGTLGNCFITGVPGSFYSRIFPSRSLDFVHSSCSVHWLSQAPAGLEKNKGHIYIANGSPPTVIEAYTNQFQRDFSLFLGLRSEEIKPGGCMVITIIGRNMEDPSSGDCCDLWELLAKSLLDMLAEVSLLTLFY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1176 222 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 82 214 IPR005299 GO:0008168
Vvi4g1176 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 214 IPR029063 -
Vvi4g1176 222 Gene3D Vaccinia Virus protein VP39 71 215 IPR029063 -
Vvi4g1176 222 Pfam SAM dependent carboxyl methyltransferase 76 214 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1176 Vvi-Chr4 18654888 18661271 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1176 - - vri:117913301 264.233