Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1175 ATGTCTCAAACTCGAACCAGTATGGATGTTGAGAAAGCCTTCCACATGACAGGAGGAGTAGGAGAAACTAGCTATGCTAGAAATTCTTCACTTCAGAAGAAGGCTTCTGATGTGGTGAAACACATAACCATAGAGACAATTCAACAACTTTATCTTACGACAACTCCAAGGAGCTTAGGCATAGCTGATTTAGGTTGTTCATCCGGGCCAAATACATTATCATTTATCAAAGATATCTTTGATGCTGTTGAAGGGACAAGCAGTCAAACTTTGCTTCCTGCGCCAGAATTCCGAGTTTACCTCAATGATCTTCCCACCAATGACTTCAACACAATCTTTAAGGCCTTGCCAGATTTCTACAAGGAGCTCAGAAAAGGAAGCAACGGGCGTCCATCAATTTTCATTGCAGGTTTTCCAGGATCATTCTATGGAAGACTTTTTCCCGACAATTGCCTGCACTTCATCTATTCCTCCTACGGTTTGCACTGGCTCTCCCAGGTTCCTCCGGCTCTTTATGACGAGCAGGGCAGATCAATAAATAAAGGCAATATCTATATTTCAAAATCCAGCCCTCCAAGTGTGTCTGAATTATACTTGAGGCAATTTCAAGAGGACTTCGCACTCTTCCTCCGGTCACGATCTGAAGAGCTGATTGAGGGAGGAAGAATGGTGCTGATCCTATTGGGAAGGAGAGGTCCAGATCATGCTGATAGAGGCAACACGTTCTTCTGGGAGCTCCTCTCTCGATCCCTAGCCATTTTGGTTTCTTGGGGAGAAGTTGAGGAGGAAAAGCTCCACTCTTATGCAGTTAATTTTTATGCGCCAACGAAAGAAGAAATAGAAGAGGAAGTGAGAAGAGAGGGTTCTTTTGAATTGGATCGGGTGGAGATGTTTGAAATAGAAAAAGATGGTGCGGATGATATGAGCTATGGAACCCAAGTTGCAAGGACAGTTAGAGCTATCCAGGAATCAATGATTAGCCTCCACTTTGGAGAAGGAATTGCAGATAGTTTGTTTGAGAACTATGGAAGACTGGTGGATGAAGAAATGGCTAAGGAAGATATCAGGCCCATCACTTTTCTTCTGGTCCTTAGAAAAAGTATGATATGA 1110 0.4315 MSQTRTSMDVEKAFHMTGGVGETSYARNSSLQKKASDVVKHITIETIQQLYLTTTPRSLGIADLGCSSGPNTLSFIKDIFDAVEGTSSQTLLPAPEFRVYLNDLPTNDFNTIFKALPDFYKELRKGSNGRPSIFIAGFPGSFYGRLFPDNCLHFIYSSYGLHWLSQVPPALYDEQGRSINKGNIYISKSSPPSVSELYLRQFQEDFALFLRSRSEELIEGGRMVLILLGRRGPDHADRGNTFFWELLSRSLAILVSWGEVEEEKLHSYAVNFYAPTKEEIEEEVRREGSFELDRVEMFEIEKDGADDMSYGTQVARTVRAIQESMISLHFGEGIADSLFENYGRLVDEEMAKEDIRPITFLLVLRKSMI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1175 369 Gene3D Vaccinia Virus protein VP39 28 301 IPR029063 -
Vvi4g1175 369 Gene3D - 14 353 IPR042086 -
Vvi4g1175 369 Pfam SAM dependent carboxyl methyltransferase 45 366 IPR005299 GO:0008168
Vvi4g1175 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 366 IPR029063 -
Vvi4g1175 369 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 15 352 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1175 Vvi-Chr4 18646513 18648928 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1175 - - vvi:100241069 727.628