Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1167 ATGGAGCAAATAGAGGAGGGCAGCTTCCATGTGGCTACTCCCATTGACTTCGAATCCAAGGACCCTGAGAACGAAGTGATTAATCCCACAATAAACGGGGTGTTGAGCATCATAAAGTCATGCGCTAAAGCGGGAAGCGTCCGGAGACTTGTGTTCACGTCGTCCGCCGGAACTGTGAATGTTGAGGAGCAGCGGCCTCCTGAGTACGACGAAAGCTGCTGGAGCGATTTGGAATTTATCAATGATAAAAAGATGCCTGGATGGATGTACTTTATGTCAACAACACTGGCAGAGAAGGCTGCAAGGGAGGCATCCATGGAGAACAACATAGAATTCGTGAGTATTATACCAACTCTCGTTGTTGGTCCATTTATAACGCCAACCATGCCACCCAGCCTCATCACTGCACTGTCCCCACTCACTGGAAATGAAGCTCACAACTCAATAGTCAATAGTGAAGCAATGCCGATACATACATTTAGATGA 486 0.4733 MEQIEEGSFHVATPIDFESKDPENEVINPTINGVLSIIKSCAKAGSVRRLVFTSSAGTVNVEEQRPPEYDESCWSDLEFINDKKMPGWMYFMSTTLAEKAAREASMENNIEFVSIIPTLVVGPFITPTMPPSLITALSPLTGNEAHNSIVNSEAMPIHTFR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1167 161 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 135 - -
Vvi4g1167 161 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 137 IPR036291 -
Vvi4g1167 161 Pfam NAD dependent epimerase/dehydratase family 19 137 IPR001509 -
Vvi4g1167 161 Gene3D - 4 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1167 Vvi-Chr4 18592950 18593688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1167 6 142 Miscellaneous Gene Families AT5G19440 40.000 3.70e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1167 K13082 - vvi:100249667 325.865