Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1165 ATGGAAAAATTCTCCCATTCCAGAAACCAAACATCCTCAGCTCTTTCTAAGAAAATCTGCAATGGCAATGGCTTCAGCGACAGGTCTGCCTACGATGACGTTTTCGGCGGTCCACCCAAGTTCGGGGTCCCGACTATCTCGCCTCGTGTGGAGGACTACACTGAGATTTTCGGAAGCTTTCATGCCTCACGCGCTTCCTCTATCCCGGTTTTGGATCTTCCCGCTGTTGACGAGGCCGATGTTTTCTTTGATGTTCAGGAGGTCGATTACTCGGATATTTTTGGCGGTTTCCGGGGTCTAGATTTTGCCGTTTCGTATGACGAGTTGCTTGGGCAGTCTAAGGATGGGGATGATTCGTCCGAGGAAGCTTGGACTCCAGCTGAAACTGGATCTCTGTCAGAAGAGTCAGATTATTCTGGGAAAAATGAATCCATGTCATATGGAGATGCTCACCAATCATTTGATGATGGTAAGGACTTCAACATTTCTTTTCATAAAGCTAATCAAAGAAGCAAAGGAGATATGTCAAATGGGGCTCATGTTACACAACTAGATGCAGTTCCTGGATATACTGTTGTGGTTGATGGAACTCCTTTGCAAAAGACAAATTATGAGAATCCACCCCTGTGGGTAACTGGTGATATCAGTCTCAGTAGGAGTTTTGGTGGGGGGAAAATCGAAGAAAAGCATCTCTGGAAAACCATGTCCTACCCACAAAATAGCAATGATGGCATGCATACATTTGAAATTGAACCTCAAGTAGGATATGGTGAAAATGGTTCTCACTCTAGTGAGACGTTTATAACTGTATCTGAAATCAGCCTTAGAACTCAGCCCTCTCCCGTGCCACCACCCTTGAGACCACCACCTATAGTAGATGTCAAAAAAGGAGATTCCAGTAGATCAGCTTCACAACTTAAAGCTAATAAGAATTATGCTTTCGAAGGGACTGCAGGTGGCAGTTCACCAGGAAGTTCTCCGCCTTTCTTTGATGTGGAGGTAGATGCCAGTTCATCCGCTGCGGCCTCTGCTGCGGCTATGAAAGAAGCAATGGAGAAAGCACAAGCAAAACTCAAAAATGCAAAAGAAATAATGGAGAGGAGGAAAGAGGGTCTTCAGAGCCGAACAAAGCTGGGTTCCAGAAATGATACAAAACACAAGGAGGGAAAGTTGAGTAGCATATCCAACAGTTTGAAAGATGAGAAAGTGCAGGGATCGTGTGAAACTCCGAAAGATTTTGTCAGAGAAGCAAGCCAAAAAGAAATGAAGACAACCCAGGTGCTTTCAGATTCTCGAGAAGGGGAAGCATTTTTAAATGTGGCTAAAAAATCTGCAGAGGGAAGGCATGGGAAGGAATCTTGGTCATCTCAAGAGTCTTATAAAACTGAAGGAACTGGAAAATGGAAAGAAGCAACAGAGTTTTATGAACTTGTAAGAGGAGATAAATTTAGAAAGGAGCAGGCAAACAATGAAAAAGTTTTGGTGAAAAATAAGAAGGTCATTGAAAGTAGGCAGAAGGAGAAAAGGGCAGCCATTGAATCATTTGAGCAGCAAGAAGAAAGTGATAAGAAAACAAATGCAGCCCAAGAGGCTCATGGATGGGAGGAAAATGAAGCTAAAGAGGCATGCAGGCATGAAGAACATGAGAAAGTTGAAGTGGCCCATGTGTTATGTGGGTGGAAAGAGAATGAGAAAACATGGAGAGTGGGCATGGAGCATGAAGAAGCTGAGCACAAACTAAATGTAGCTGATGAATGGGAAGAACATGATATCTTGATAGAGATACAGCAGAAACAAAATGAGGTGGAAGTTAAGGAAGCTATGAAGCAGGAGAATGAAAGGAAACTGAAAGAGGCTAAGGAAAGAACAGGGAATGAGAGAAAACTCAAGAAGGCTCGCGAAAATGAAAAAAGTGAAAAGAGACTAAAAGAGGCTTTGGAGCAGGAAGAAACTGAGAAAAAACTAAAAGCTGAAAATGAAAAAAGACTAGAGGCTCTTAAATGGCAAGAAAATGAGAAGAAAAAGAAAGAGGCTCGTGAAAGAGAAGAAAATGAGAGGAGATTGAAAGTGGCTCTTGACTGGGAAGAGAATGAGAAGAAGCAGAAAGAGGCTTGTGAAAGAGAAGAAAATGAGAAGAGACTAAAACAGGCTATTGAGCAGGAGGAAAATGAGAAGAGATTAAAAGAGGCTCTCAAACAGGAACAAATTCTGAAGAAACAGAAGGAGGCTTGTGAAAGAGAAGAAAATGATAAGAGGTTAAAAGAAGCACTTGAGCATGAGGAAAATGAGAAGAAACAAAAAGCTCATGAGAAGAGACTGAAAGAAGCTTGTGAAAGAGAAGAGATTGAGAAGAAGCTAAAAGATGCTCGTGAAAGAGAAGAGATCGAGAAAAGGCGAAAGGATGTTCATAGACAAGCTGAAGATAAGAGAAGATTGAACAAGACCCATGAAAGAAAGGAGAGTGAGAAGAGATTAGAAGAGATGCCAGAGTGGGAAGAAACTGACAAAAGATTAAAAGAGGCCACAAAGTTGGAAGAAAGCGAGAAGAGGCCTGGAGATTCTGGTGATGTGGAAGAACTGAAGGGGCTAAAGAAAGCTCATGATCAAATTGTCAATGAAAATGAAAAGAAACTAAAATCTTGTCAAGGAACTTATGCACAAATGGAGGAGAATAATTTCAAGGCAACTGATGAGGCATGTAAGCTGCATGAGAACAAAAACATTCAGGCTGCTCAAGTAGCCCCCAAATATGAAGTGAACAGTTTGGAAGCAAATCAAGAGGCCCTTGGACAGGAGGAGAAATTAAAGATTGCTGCTGAATCACAAGGTATTCATAAGGATTTCAAAGCAGTTGAAATGGAAAATATACTGGTTGAAGAAATATTTGAAGCATCAGGCATGGCTGATGGTGATGCAGAGCAAGAAAAGAATAAGATCAGAATGGACAATTCCACAGGGTCAGTTCTTTTGGATGAGAATGTGAAAAAATCGCTTGAAGCTGGCATTGGCATTGGCATTGGACAAGCACACTTGGAGAAAAATTTGAGAGCTGCCCAGATGGCCTCCAATCCTGAAGATCTGAAAAAGAATTTCACTTCTGAATGGGGAGAGGGAGAGAAGAGTATGAAGCAGACTTCGGTTTCCTTTGAGCCAGAGGATAGCAAGGATAAATTTAGACCAAGTCAAGTGTTGAAAGAGTGGGTTGAAAATGGAAAGAAAGTGGAAGCAGCTCAGACAGCTACATTGGAAGGGAAAGGGAACATCCAGAAAACAGCTCAGCAGGTTAGCAATGGGCAAAGCACAGAAAAAAAGGAAAAGAATATTAACGAGACTCCAACACTAGAAGAGAGAGAAAGGGAAGAACGGATGAAGAGAGAAAGAGAGCTGGAAAAGGACCGGCTTAGAAAATTGGAAGAGGAAAGGGAGAGGGAAAGAGAAAGAGAAAAGGATAGGATGGCTGTTGACAGAGCAACCCGTGAAGCTCGTGACAGGGCATATGTTGAAGCCCGTGAGAGGGCTGAAAGAGCTGCTGTTGAGAAAGCGACTGCTGAAGCACGACAAAGAGCACTAACAGAAGCCCGAGAAAGGTTAGAGAAGGCATGTGCGGAGGCTAGAGAGAAGACATTATCTGATAAGACTTCTATAGAAGCCAGGCTCAGGGCAGAGCGTGCTGCAGTAGAGAGAGCAACAGCAGAGGCTCGAGAGCGTGCTTTTGAAAAAGCAATGGCTGAGAAAGCTGTCTCTGATGCAAGAGAACGAATGGAAAGATCTGTTTCCGATAAATTTTCTGCTTCTTCAAGAAATAGTGGATTGCGACAGAGCTCTTCATCCTCTGATCTGCAGTCTCAAAGCACAGGGTCTTCTAGTGGTTCAAGATATCCATATTCCTCGGTTTATGGTGCTTCCTATAACACTGAAAAATCTGAAGGAGTTGAAGGCGAATCAGCCCAAAGATGCAAAGCTAGATTAGAGAGATATCGGAGGACAGCTGACCGCGCGGCTAAAGCTCTTGCAGAGAAGAATAAACGTGATCTTCTTGCTCAAAGAGAGCAAGCAGAGAGAAATAGGTTAGCAGAAACTTTGGATGCTGATGTCAAGAGATGGTCAAGTGGAAAAGAAGGGAACCTGCGTGCATTGCTTTCAACATTGCAATATATCCTAGGACCTGATAGTGGTTGGCAACCAATTCCATTAACGGATGTTATAACTGCTGTTGCTGTAAAGAAAGCTTATAGAAAAGCCACTCTTTGTGTTCATCCTGACAAATTACAACAAAGGGGTGCAAGCATTCAACAGAAGTACATATGTGAAAAGGTTTTTGATCTTCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGGTGA 4368 0.4256 MEKFSHSRNQTSSALSKKICNGNGFSDRSAYDDVFGGPPKFGVPTISPRVEDYTEIFGSFHASRASSIPVLDLPAVDEADVFFDVQEVDYSDIFGGFRGLDFAVSYDELLGQSKDGDDSSEEAWTPAETGSLSEESDYSGKNESMSYGDAHQSFDDGKDFNISFHKANQRSKGDMSNGAHVTQLDAVPGYTVVVDGTPLQKTNYENPPLWVTGDISLSRSFGGGKIEEKHLWKTMSYPQNSNDGMHTFEIEPQVGYGENGSHSSETFITVSEISLRTQPSPVPPPLRPPPIVDVKKGDSSRSASQLKANKNYAFEGTAGGSSPGSSPPFFDVEVDASSSAAASAAAMKEAMEKAQAKLKNAKEIMERRKEGLQSRTKLGSRNDTKHKEGKLSSISNSLKDEKVQGSCETPKDFVREASQKEMKTTQVLSDSREGEAFLNVAKKSAEGRHGKESWSSQESYKTEGTGKWKEATEFYELVRGDKFRKEQANNEKVLVKNKKVIESRQKEKRAAIESFEQQEESDKKTNAAQEAHGWEENEAKEACRHEEHEKVEVAHVLCGWKENEKTWRVGMEHEEAEHKLNVADEWEEHDILIEIQQKQNEVEVKEAMKQENERKLKEAKERTGNERKLKKARENEKSEKRLKEALEQEETEKKLKAENEKRLEALKWQENEKKKKEAREREENERRLKVALDWEENEKKQKEACEREENEKRLKQAIEQEENEKRLKEALKQEQILKKQKEACEREENDKRLKEALEHEENEKKQKAHEKRLKEACEREEIEKKLKDAREREEIEKRRKDVHRQAEDKRRLNKTHERKESEKRLEEMPEWEETDKRLKEATKLEESEKRPGDSGDVEELKGLKKAHDQIVNENEKKLKSCQGTYAQMEENNFKATDEACKLHENKNIQAAQVAPKYEVNSLEANQEALGQEEKLKIAAESQGIHKDFKAVEMENILVEEIFEASGMADGDAEQEKNKIRMDNSTGSVLLDENVKKSLEAGIGIGIGQAHLEKNLRAAQMASNPEDLKKNFTSEWGEGEKSMKQTSVSFEPEDSKDKFRPSQVLKEWVENGKKVEAAQTATLEGKGNIQKTAQQVSNGQSTEKKEKNINETPTLEEREREERMKRERELEKDRLRKLEEEREREREREKDRMAVDRATREARDRAYVEARERAERAAVEKATAEARQRALTEARERLEKACAEAREKTLSDKTSIEARLRAERAAVERATAEARERAFEKAMAEKAVSDARERMERSVSDKFSASSRNSGLRQSSSSSDLQSQSTGSSSGSRYPYSSVYGASYNTEKSEGVEGESAQRCKARLERYRRTADRAAKALAEKNKRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITAVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER* 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 740 864 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 275 304 - -
Vvi4g1165 1455 Coils Coil 595 622 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1103 1166 - -
Vvi4g1165 1455 SUPERFAMILY Chaperone J-domain 1306 1454 IPR036869 -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 503 534 - -
Vvi4g1165 1455 Coils Coil 1212 1236 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1261 1294 - -
Vvi4g1165 1455 Coils Coil 628 686 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 606 689 - -
Vvi4g1165 1455 ProSiteProfiles dnaJ domain profile. 1391 1455 IPR001623 -
Vvi4g1165 1455 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 834 1455 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 113 150 - -
Vvi4g1165 1455 Coils Coil 1166 1207 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 362 395 - -
Vvi4g1165 1455 FunFam Auxilin-related protein 1 1326 1455 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 124 149 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1020 1062 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1 22 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 7 22 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1082 1102 - -
Vvi4g1165 1455 Gene3D DnaJ domain 1329 1455 IPR036869 -
Vvi4g1165 1455 Coils Coil 344 375 - -
Vvi4g1165 1455 Coils Coil 1316 1355 - -
Vvi4g1165 1455 Coils Coil 1117 1151 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1246 1260 - -
Vvi4g1165 1455 Coils Coil 871 891 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1078 1166 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 1246 1294 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 362 465 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 404 419 - -
Vvi4g1165 1455 Coils Coil 691 812 - -
Vvi4g1165 1455 MobiDBLite consensus disorder prediction 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1165 Vvi-Chr4 18579353 18591842 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1165 - - vvi:100244517 2562.72