Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1163 ATGGAAGTTGTTGTGAAGGAAGAAATGGCTAACCATGATGGAGAAATAAGCTCCAAAACTTCGGGATTCCCTCATCATGTAGTTCTCAATGAAAGGATCCTTTCTTCTATGTCACGGAGATCTATTGCTGCTCATCCTTGGCATGACTTAGAGATTGGACCGGGTGCTCCATCAGTTTTCAATTGCGTAGTTGAAATTGGCAAGGGCAGCAAGGTTAAGTATGAGCTTGACAAAGCAAGTGGCTTGATAAAGGTTGATCGTGTTCTTTACTCATCAGTTGTTTATCCACATAACTATGGTTTCATCCCTCGAACCATCTGTGAAGACAGCGATCCTATGGATGTCCTGATTCTAATGCAGGAGCCGGTACTGCCTGGTTCTTTTCTTCGTGCTCGTGCGATTGGATTAATGCCTATGATTGATCAGGGTGAAAAGGATGACAAAATAATAGCAGTGTGTGCTGATGACCCTGAGTTCCGCCACTACAAAGACATCAAAGAGATTCCCCCACATCGCCTTGCTGAGATCCGCCGCTTCTTTGAGGACTACAAGAAGAACGAAAACAAAGAAGTTAACGTGAACGACTTTCTTCCAGCTGATTCTGCCATTGAAGCCATCAAGTACTCAATGGATCTGTATGCTTCCTACATTGTTGAGAGCTTGAGGCAGTGA 672 0.4405 MEVVVKEEMANHDGEISSKTSGFPHHVVLNERILSSMSRRSIAAHPWHDLEIGPGAPSVFNCVVEIGKGSKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLILMQEPVLPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKEIPPHRLAEIRRFFEDYKKNENKEVNVNDFLPADSAIEAIKYSMDLYASYIVESLRQ* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1163 223 ProSitePatterns Inorganic pyrophosphatase signature. 109 115 - -
Vvi4g1163 223 Gene3D Inorganic pyrophosphatase 41 219 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi4g1163 223 FunFam Soluble inorganic pyrophosphatase 4 41 219 - -
Vvi4g1163 223 Pfam Inorganic pyrophosphatase 62 213 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi4g1163 223 CDD pyrophosphatase 59 211 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi4g1163 223 PANTHER INORGANIC PYROPHOSPHATASE 7 223 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi4g1163 223 Hamap Inorganic pyrophosphatase [ppa]. 58 214 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi4g1163 223 SUPERFAMILY Inorganic pyrophosphatase 39 217 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1163 Vvi-Chr4 18564456 18568004 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1163 K01507 - vvi:100254798 433.335