Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1162 ATGAAAATTTTAACAGCAGGACTTATGGTTCCTTTCTTTTTGCTCGTATTTTCTTGGCAACCGAACGAACAGAAACGTTTCTCTTCTCTGGGGATGTTTCTGGAAAATCAGAGTGAAATCTCACTTCACATGGAGGAAAACGGAGGCGATTTCGCCTTGGCTGCGGCGCCGCTGGCCAAATGGAAGAGCGACTTTTCGAGGGCTTTTCAGTACTATTTGGATAGATCTGCACCACATATAGCTGAGAGGTGGCTAGGAACACTAGTGGCAGCATCAATTTACTTTTTGCGAGTTTACTATGTTCAAGGGTTTTATGTGATCTCCTATGGGTTGGGAATCTATGTTTTGAATCTCTTGATCGGCTTTCTGTCGCCCAAGGTTGATCCTGAACTGGAGGCTTTGGATGGGGCTTCGCTGCCCACGAAAGATTCCGACGAGTTTAAGCCTTTCGTTAGACGCCTCCCTGAATTTAAGTTCTGGTATTCCATTACCAAGGCTTTTGTTGTTGCATTCGGATTGACCTTCTTCTCTATGTTGGATGTACCTGTTTTCTGGCCCATATTGTTATGCTACTGGATATTTCTGTTTGTCCTCACGATGAAGCGTCAAATTCTACACATGATCAAATACAAATACGTCCCATTTGACATGGGAAAGATGAGGTACACTGGGAAGAAGCCTTCTGCAAGTGGCAGCCGGTTAGCTAGAGACTGA 714 0.4454 MKILTAGLMVPFFLLVFSWQPNEQKRFSSLGMFLENQSEISLHMEENGGDFALAAAPLAKWKSDFSRAFQYYLDRSAPHIAERWLGTLVAASIYFLRVYYVQGFYVISYGLGIYVLNLLIGFLSPKVDPELEALDGASLPTKDSDEFKPFVRRLPEFKFWYSITKAFVVAFGLTFFSMLDVPVFWPILLCYWIFLFVLTMKRQILHMIKYKYVPFDMGKMRYTGKKPSASGSRLARD* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1162 237 PANTHER PROTEIN RER1 54 228 IPR004932 GO:0016020
Vvi4g1162 237 Pfam Rer1 family 61 222 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1162 Vvi-Chr4 18558907 18560591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1162 44 236 Miscellaneous Gene Families AT2G21600 65.803 1.97e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1162 - - vri:117911982 481.485