Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1158 ATGGAGGCTTCATTCAGGATCTTCAATTCCTCGGCTCTCAATCGCCGCCACCTCTCCGCTTCACTTCTTAACAAATCTACTTCTCTCAAATTCCCTCCCACCCTTCACCGTCCTTCACTCTGTCGGAGGGTTTCGCCGTCTTCTCCGCTCTTCGTCGCTTTTCCCAACGTTGTTTCCATAAACCCCAAATGTTTCGCTCGCATTCGCGCTTCCTCATCGATCGGGCCTTTTCCGCCGTGCCCTTCTCCAAATTCTAATCCATTTGGGTTTCTTCTATCTCTCTCTCATTCTCACTCCTCTCCTCCGCTGGAGTTCGATTCCAATGAGAAGGTTCTGGAGTGGAATCGAGCTCCCGAGGGAGGCGTTAATGGCGGAAGTGTAAGGGATCGTGGTCCTGCCGTCACGGTGGTGTTGCTGGGTTGGCTTGGAGCGAAGCCGAAGCACTTGAGGAGGTACGTGGATTTGTATACTTCCAGGGGAATTCACGCCGTAACTTTCGTTGTTCCCGTGAGAGAGGTGCTCTGGATTGATTTGGGAAGGAGGGTTGAGAAACGGATCGCGGAGATGACTCAGGAGCTGGTTTCGTGGTTATCGGAAACGGAAAATGATGGTCGCGAGCGGCACTTGCTTTTTCACACCTTCAGCAATACCGGTTGGTTTGCTTATGGTGCAATTCTTGACCACTTGCAGGGTAGACCGGACCTAATGGAGAAGATCAAAGGATGTGTCGTTGATTCGGGAGGTGACCCGGAAATAAATCCTCAGGTCTGGGCAGCTGGATTTTCTGCTGCACTGCTGAAAAAAAACAGCTCTTCAGCATACTCTTTAGTTGAAGTCACAGAAAGAAATGAATCCAAAAGCAAAGTAGATTCATCAAAGGTGCAAGAAAAGGAGCCTCTGATAATTGAAACCATGCTTTTGTCGGTATTAGAGTTCTTCTTCTCTGTTATTCTAAGGTTGCCTGATGTAAATCGGAGGTTAACAAAGATCATCTCCATCCTCTCAAAGAACCAGCCTCCCTGTTCACAACTTTACCTGTATAGCACAGCTGATAAAGTCATTCCATATCACTCAGTAGAAATGTTTATCAATGAGCAGATGAGGATGGGAAAAAAAGTGCGGTCCTTTAACTTTGGATTATCCCCCCATGTAGACCATTACAGGACTTTCCCAAATCTATATTCTTCAGAAATACATAATTTCTTGAAGGAGTGTTTGGCTGAAGTCAAGAAGATGTAA 1239 0.4681 MEASFRIFNSSALNRRHLSASLLNKSTSLKFPPTLHRPSLCRRVSPSSPLFVAFPNVVSINPKCFARIRASSSIGPFPPCPSPNSNPFGFLLSLSHSHSSPPLEFDSNEKVLEWNRAPEGGVNGGSVRDRGPAVTVVLLGWLGAKPKHLRRYVDLYTSRGIHAVTFVVPVREVLWIDLGRRVEKRIAEMTQELVSWLSETENDGRERHLLFHTFSNTGWFAYGAILDHLQGRPDLMEKIKGCVVDSGGDPEINPQVWAAGFSAALLKKNSSSAYSLVEVTERNESKSKVDSSKVQEKEPLIIETMLLSVLEFFFSVILRLPDVNRRLTKIISILSKNQPPCSQLYLYSTADKVIPYHSVEMFINEQMRMGKKVRSFNFGLSPHVDHYRTFPNLYSSEIHNFLKECLAEVKKM* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1158 412 Pfam Eukaryotic protein of unknown function (DUF829) 135 402 IPR008547 -
Vvi4g1158 412 SUPERFAMILY alpha/beta-Hydrolases 129 406 IPR029058 -
Vvi4g1158 412 PANTHER UNCHARACTERIZED 106 407 IPR008547 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1158 Vvi-Chr4 18544266 18546642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1158 - - vvi:100256387 803.897