Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1157 ATGGCGGTTTCAAATTCGAAAGACTCCTTTGCTGATTCAAATCTCTCTCCACCAAATTCATATGGAGCTGTTGTTCTGGGCGGAACTTTTGATAGATTACACGACGGCCATCGCTTTTTTCTCAAGGCATCGGCTGAGCTTGCAAGGGATCGTATTGTCATTGGGGTTTGTGATGGACCGATGTTGAGTAAAAAACAGTTTGCTGGTCTAATAGAACCGATTGAGAAAAGGATGCATAGTGTTGAAGAGTATATTAAGTCTATCAAACCAGAGCTAGTAGTGCAACTTGAACCGATTATTGACCCCTATGGTCCTTCAATCATTGATGAAAATTTGGAGGCTATTGTTGTCAGCAAGGAGACTTTACCTGGGGGACTATCAGTAAATAAGAAGAGAGCTGAGAAAGGGCTCTCACAACTAAAGGTTTGA 429 0.4196 MAVSNSKDSFADSNLSPPNSYGAVVLGGTFDRLHDGHRFFLKASAELARDRIVIGVCDGPMLSKKQFAGLIEPIEKRMHSVEEYIKSIKPELVVQLEPIIDPYGPSIIDENLEAIVVSKETLPGGLSVNKKRAEKGLSQLKV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1157 142 NCBIfam cytidyltransferase-like domain 24 88 IPR004821 GO:0003824|GO:0009058
Vvi4g1157 142 Pfam Cytidylyltransferase-like 26 90 IPR004821 GO:0003824|GO:0009058
Vvi4g1157 142 Gene3D HUPs 23 142 IPR014729 -
Vvi4g1157 142 FunFam Bifunctional coenzyme A synthase 23 142 - -
Vvi4g1157 142 CDD PPAT_CoAS 24 142 - -
Vvi4g1157 142 PANTHER DEPHOSPHO-COA KINASE-RELATED 40 141 - -
Vvi4g1157 142 SUPERFAMILY Nucleotidylyl transferase 24 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1157 Vvi-Chr4 18537523 18539923 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1157 K02201 K02318 vvi:100248299 242.662