Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g1152 | ATGGCAACGGAGTCATCGGAGGGAGAGGAAGAGGGCAAGATGATCGGAGGAAATCAGCACCTGGTTGTCGACGAAGACCTCCGTGAGATGGCCAAGAAGGCTGCTTGGAGCGTTAGTTCTTGCAAGGCTGGCAATGGCGTCCTTCTTCTTCGCGACGACAACCTCGATACCTATTGGCAATCCGACGGTGCTCAGCCTCATCTTGTAAACATTCAATTCCTCAAGAAAGTGAAGTTGCAACTGGACGAGAGCTACACGCCGAGTAAGATCTCTATTCGAGCCGGAGATGGCTTCCACAACTTGAAGGAGATAAAGACTGTGGAACTTGTCAAGCCAACTGGTTGGGTTTACATATCCCTATCTGGAAATGATCCTCGGGAAACTTTTGTGAACACTTTTATGTTGCAAATTGCTATATTGTCAAATCACCTTAATGGGAGAGATACTCATGTGCGCCAGATCAAAGTTTATGGGCCTCCACCGAACCCCATCCCACGCCAGCCCTTCCAATTCACTTCAAGGGAGTTCATTACTTACTCTTCTGTGAGATGA | 552 | 0.4819 | MATESSEGEEEGKMIGGNQHLVVDEDLREMAKKAAWSVSSCKAGNGVLLLRDDNLDTYWQSDGAQPHLVNIQFLKKVKLQLDESYTPSKISIRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRETFVNTFMLQIAILSNHLNGRDTHVRQIKVYGPPPNPIPRQPFQFTSREFITYSSVR* | 184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g1152 | 183 | Gene3D | - | 1 | 160 | - | - | |
| Vvi4g1152 | 183 | FunFam | Anaphase-promoting complex subunit 10 | 1 | 160 | - | - | |
| Vvi4g1152 | 183 | Pfam | Anaphase-promoting complex, subunit 10 (APC10) | 23 | 180 | IPR004939 | - | |
| Vvi4g1152 | 183 | CDD | APC10 | 28 | 158 | IPR016901 | GO:0005680|GO:0031145 | |
| Vvi4g1152 | 183 | ProSiteProfiles | DOC domain profile. | 6 | 183 | IPR004939 | - | |
| Vvi4g1152 | 183 | PANTHER | ANAPHASE-PROMOTING COMPLEX 10 | 17 | 183 | IPR016901 | GO:0005680|GO:0031145 | |
| Vvi4g1152 | 183 | SMART | APC10_2 | 27 | 182 | IPR004939 | - | |
| Vvi4g1152 | 183 | PIRSF | APC10 | 2 | 183 | IPR016901 | GO:0005680|GO:0031145 | |
| Vvi4g1152 | 183 | SUPERFAMILY | Galactose-binding domain-like | 18 | 159 | IPR008979 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g1152 | K03357 | - | vvi:100256398 | 359.377 |