Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1137 ATGTGGCGAAGGTATTTCAGTAGCAACATCAACTCCACGCGCACATTGAAGGAGAAGAAATGGGACGCTCTGGTGATCGGCGCCGGCCACAACGGCCTCACAGCCGCTGCTTACTTGGCTCGCTCTGGCCTCTCCGTCGCCGTTCTCGAGCGTCGCCACATCATCGGCGGTGCTGCCATCACTGAAGAACTCGTTCCTGGCTTTAAGTTCTCCCGCTGCAGCTACGTCCAGAGCCTCCTCCGCCCCTCCATCATCAAGGACTTGGAGTTGGCAAAACATGGGTTGAAGTTGTTGAAGATGAAAGCGGCTACGTTCACACCCTGTGTTGATGGTCGCTATCTTCTTTTGACTTATAATCAGAAGCAAAATTACAAGGAGATTTCCAGGTTCTCAAAACGAGATGCAGATGCTTTTCCAAGATATGAAAGTCAACTAATTAAATTCTGTGAAGTCATGGATTTTCTTTTGGATTCACTTACTCCCGAAACATTAAATCATGATTCATCTTTTACCGATCGGCTGAGAGACAAGTTGAACAAGTCAGTTTTTTGGGGTCGTTTTCTGCATCGGGTTCTCTCACTGGGGCAGAAAGATTTGGTGGACTTTGTGGACCTTCTGTTGTCCCCAACTTCAAAGGTTTTGAACTACTGGTTTGAGACAGATGTGCTGAAGGCAACACTTGCAGGGGATGCTATCATTGGGAGTATGGCAAGCATCCATGCACCTGGAAGTGGATATGTTCTGCTGCATCATGTAATGGGCAATACTGATGGTGAACGTAATGTTTGGTCGCATGTTGAAGGTGGCATGGGTTCAGTATCATCAGCTATAAGTAAGGCTGCTAGGGAGGTTGGGGCACATATTGTGACAAATGCAGAGGTTTCACAGTTGATGATTGAAGACTCTGGTGTTGTAAATGGGGTACTACTGGAGGATGGGACACAGGTGTATTCTTCTGTTGTTTTGTCAAATGCAACCCCTTATAAGACTTTCATGGAATTAGTGCCTCAAAATGTTCTTCCAGATGATTTTTTCCATGCTATTAAGAACATTGACTACAAATCTGGAACCACAAAAATTAATGTAGCTGTTGATAAATTGCCTGAGTTCCAGTGTTACAAGTTCAACCATCCAGAAGCAGGTCCTCACCATACAGCTACCATTCACATTGGTACTGACAGTATGGAGGAGATTGGCTTAGCTTGTCAAGATGCTTGGAATGGCCTATCATCACGGAGGCCTGTTATTGAGATGACAATTCCTTCTTCATTGGACAAGACTATTTCTCCTCCTGGTAAGCATGTGGTCAGTCTATTTACACAATATACACCCTATAATCTCACCGATGGTAGCTGGGAAGATCCTGCATACAGAGAATCATATGCAAAAAGGTGTTTCAACTTGATTGATGAATATGCCCCTGGCTTTAGCTCATCTGTCATTGGTTATGACATGCTGGCACCACCGGATCTTGAGAGGGTGATTGGTCTGACAGGGGGGAATATTTTTCATGGTGCTATGAGTTTGGATTCTCTTTTCCTGATGCGCCCTGTCAAAGGATGGTCAGGTTATAGGACTCCAGTGAGAGGGCTGTATTTGTGCGGCAGTGGAACACATCCTGGTGGTGGTGTGATGGGGGCGCCTGGTCGTAACTCTGCGCAAGTCGTCATTCAAGATCTTAAAAAATATTACGTATGA 1698 0.4552 MWRRYFSSNINSTRTLKEKKWDALVIGAGHNGLTAAAYLARSGLSVAVLERRHIIGGAAITEELVPGFKFSRCSYVQSLLRPSIIKDLELAKHGLKLLKMKAATFTPCVDGRYLLLTYNQKQNYKEISRFSKRDADAFPRYESQLIKFCEVMDFLLDSLTPETLNHDSSFTDRLRDKLNKSVFWGRFLHRVLSLGQKDLVDFVDLLLSPTSKVLNYWFETDVLKATLAGDAIIGSMASIHAPGSGYVLLHHVMGNTDGERNVWSHVEGGMGSVSSAISKAAREVGAHIVTNAEVSQLMIEDSGVVNGVLLEDGTQVYSSVVLSNATPYKTFMELVPQNVLPDDFFHAIKNIDYKSGTTKINVAVDKLPEFQCYKFNHPEAGPHHTATIHIGTDSMEEIGLACQDAWNGLSSRRPVIEMTIPSSLDKTISPPGKHVVSLFTQYTPYNLTDGSWEDPAYRESYAKRCFNLIDEYAPGFSSSVIGYDMLAPPDLERVIGLTGGNIFHGAMSLDSLFLMRPVKGWSGYRTPVRGLYLCGSGTHPGGGVMGAPGRNSAQVVIQDLKKYYV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1137 565 Gene3D - 20 128 IPR036188 -
Vvi4g1137 565 SUPERFAMILY FAD/NAD(P)-binding domain 19 440 IPR036188 -
Vvi4g1137 565 PANTHER PHYTOENE DEHYDROGENASE 12 562 - -
Vvi4g1137 565 Pfam Flavin containing amine oxidoreductase 32 357 IPR002937 GO:0016491
Vvi4g1137 565 Gene3D - 224 368 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1137 Vvi-Chr4 18370620 18382064 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1137 - - vvi:100265006 1144.8