Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1135 ATGTTACGAAAATGCCCATCCGGAATAAACAAGGGAGTAGTGTTGGTTTGGGCGATAACTCTCCCAAAATCTATATACAGAGGCAGAGGAGGAGTGGGGTACGTAGCAAGAGGGGATAGCGAGGAAGACATGATACGGGCGGTGATAGTGATGAACACACAGGGCAAGCCCCGCCTCACCAAATTTTACGATTACATGCCTCCGGAGAAGCAGCAAGAACTCATTCGGCGCGTCTTTGGAGTCTTATGCAGTAGAGCTGAGAACGTCAGCAATTTTGTGGAGGCGGATTCGGTTTTTGGTCCGGATACTCGTCTTGTGTACAAGCACTATGCAACTCTCTATTTTGTCTTTGTATTTGATAGTTCTGAAAATGAGTTAGCCATGCTTGATTTGATACAAGTTCTGGTGGAAACATTGGACAAGTGCTTCAAAAATGTATGCGAGCTTGACATAGTGTTCAATTATAGCAAGTTGCATACTATTTTGGATGAGATCATTTTTGGCGGTCAAGTGCTAGAAACAAGTTCTGCAGAAGTTATGAAGGCTGTTGAAGAAATATCAAGGTTGGAAACAGCCTCAAATACTATCACACTTGTCCCTAAGTCCATTTCTGGTTGGCGAAGTTGA 627 0.437 MLRKCPSGINKGVVLVWAITLPKSIYRGRGGVGYVARGDSEEDMIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDTRLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILDEIIFGGQVLETSSAEVMKAVEEISRLETASNTITLVPKSISGWRS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1135 208 Coils Coil 172 192 - -
Vvi4g1135 208 CDD AP3_sigma 44 188 IPR027155 GO:0006896|GO:0030123
Vvi4g1135 208 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 45 190 IPR016635 GO:0015031
Vvi4g1135 208 Gene3D - 44 202 - -
Vvi4g1135 208 SUPERFAMILY SNARE-like 44 187 IPR011012 -
Vvi4g1135 208 FunFam AP complex subunit sigma 44 199 - -
Vvi4g1135 208 Pfam Clathrin adaptor complex small chain 44 188 IPR022775 -
Vvi4g1135 208 ProSitePatterns Clathrin adaptor complexes small chain signature. 105 115 IPR000804 GO:0006886|GO:0016192|GO:0030117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1135 K12399 - vvi:100254708 326.635