Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1132 ATGACTTTGGGTCTGATCAATGCGAACCCAGTGGTTCACGCCAAGAAGGAGAGGGTCGCTCGAACCGAAGACCTCCATGGCGACGATGCCGTCGATCCTCTTGAAATCTATGATTTTGTGAGGGACATTAGAGATCCGGAGCATCCGTATTCACTAGAACAGCTTAGTGTGCTGTCGGAGGAATCCATTACTGTTGATGAGAAGCTTGGGCGAATTTTGATAACATTCACTCCAACGATCCAGCATTGCAGCATGGCAACAGTAATTGGCTTATGTCTGCGAGTTAAACTAAAACACTATTTCCCTCCACATTTCAAGGTTGACATCAAAGTATCTCCTGGATCTCATGCAAATGAAGAATCAGGAGCCCCTGGAGCGTAG 381 0.4672 MTLGLINANPVVHAKKERVARTEDLHGDDAVDPLEIYDFVRDIRDPEHPYSLEQLSVLSEESITVDEKLGRILITFTPTIQHCSMATVIGLCLRVKLKHYFPPHFKVDIKVSPGSHANEESGAPGA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1132 126 Gene3D - 28 117 IPR034904 -
Vvi4g1132 126 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 35 119 IPR034904 -
Vvi4g1132 126 FunFam Protein AE7-like 1 26 117 - -
Vvi4g1132 126 PANTHER UNCHARACTERIZED 1 121 IPR039796 GO:0106035
Vvi4g1132 126 Pfam Iron-sulfur cluster assembly protein 35 111 IPR002744 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1132 Vvi-Chr4 18302011 18304174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1132 - - vvi:100259830 241.121