Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1119 ATGGCTCGGCTTGGGGTTAACCAGCGAGCTGTAGCGGCGGTAGCAGCAACATCAGCATTGGTGGTGTGCTTGGGGCTTGTCATGATGAGTGGTGTAGGCAATGCAGAGAGACTTTTGAAGGCAGATGATCGGCCAGCTGAACATTTGGTTAACAAAAATAAGGAACCAGGATTTCTATCCAAAGTGGTTCACTTTCTCTGGCAGAGTGGGAAGTCTTCATATCAGCATGTTTGGCCGGATATGAAGTTTGGGTGGAAACTGGTGGTAGCTTCAATAATTGGATTCTTTGGTGCAGCATTGGGGAGTGTAGGAGGAGTAGGAGGCGGTGGGATTTTTGTTCCAATGCTCACCTTGATCGTCGGCTTCGACCCCAAGTCCTCAACTGCCATTTCTAAATGTATGATAATGGGGGCTGCAGGATCAACAGTATACTACAATATGAGGCTTAGACATCCAACACTAGACATGCCCATCATAGATTATGACCTGGCCTTGCTCTTCCAGCCCATGCTCATGCTAGGCATCAGCATTGGTGTTGCCTTCAATGTCATCTTTGCTGATTGGATGGTCACTGTTCTCCTTATCATCCTCTTCTTAGGTACATCAACTAAGGCTTTATTCAAAGGCATAGAAACATGGAAGAAGGAGACAATCATGAAGAAGGAAGCAGCTAGGCTGTTGGAAGCAGAGACCAAGCCAACTGATAATACTGGAGGAGGGGATTACAGACCACTACCCAGTGGTCCGGCTACCATCCGAGATGATCACGTTCCCGTCATATACAACATTTGCTGGAAAGAGTTGGCACTGCTAGTGTACGTGTGGGTGGCTTTCCTTGCTGTTCAGATTGTCAAGACATACACGGTGACGTGCTCAATAGAGTATTGGGTTCTGAATTGCTTACAGGTACCCATTGCGGCCTCAGTTTCGATATATGAAGCCGTATGCTTGTACAAAGGGACCAGGGTGATTGCATCAAAGGGAAAGGAAGTCACAAACTGGAAGATACATCAGATTTTTCTTTACTGTTCATGTGGGATAGTAGCAGGCTTAGTGGGTGGATTGCTTGGGCTTGGAGGCGGCTTCATCTTGGGACCCCTTTTTCTTGAATTGGGAATTCCACCCCAGGTTGCGAGTGCAACATCAACCTTTTCAATGGCATTCTCCTCCTCCATGTCAGTTGTACAATACCACCTTCTAAGGCGCTTCCCAGTCCCATATGCTTCTTATTTTGTCCTAGTTGCTACAATAGCCGCCCTTGTTGGTCAGCACGTGGTCAGAAAAGTAATAAAACTTGTAGGCAGGGCTTCAATAATCATCTTCATTTTGGCTCTCACAATCTTTATCAGTGCAATCAGTTTAGGCGGAGTGGGCATAATGACTATGGTTGAGAAGCTGGCGAACAATGAGTACATGGGGTTCGATGATCTCTGCTATCAGTCTTAG 1446 0.4654 MARLGVNQRAVAAVAATSALVVCLGLVMMSGVGNAERLLKADDRPAEHLVNKNKEPGFLSKVVHFLWQSGKSSYQHVWPDMKFGWKLVVASIIGFFGAALGSVGGVGGGGIFVPMLTLIVGFDPKSSTAISKCMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTVLLIILFLGTSTKALFKGIETWKKETIMKKEAARLLEAETKPTDNTGGGDYRPLPSGPATIRDDHVPVIYNICWKELALLVYVWVAFLAVQIVKTYTVTCSIEYWVLNCLQVPIAASVSIYEAVCLYKGTRVIASKGKEVTNWKIHQIFLYCSCGIVAGLVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMAFSSSMSVVQYHLLRRFPVPYASYFVLVATIAALVGQHVVRKVIKLVGRASIIIFILALTIFISAISLGGVGIMTMVEKLANNEYMGFDDLCYQS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1119 481 PANTHER CEREBLON 24 478 - -
Vvi4g1119 481 Pfam Sulfite exporter TauE/SafE 92 211 IPR002781 GO:0016020
Vvi4g1119 481 Pfam Sulfite exporter TauE/SafE 344 449 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1119 Vvi-Chr4 18131332 18134520 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1119 - - vvi:100253061 867.84