Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1111 ATGAAGGATGATGATTCTCTTCCGACAACCGCGCCGACCACAAATGCGAAGAAAGATAGCTCAGATGCGAGTGTTTTTGGGAGGGGTCGGTACAAGTTCTGGGCGTTGGCAGCGATTCTGCTCCTCGCTTTCTGGTCTATGTTCACGGGCACCGTTACTCTCCGGTGGTCCGCCGGCAACCTCAACCATATTTCCGACGACCTCGACTCCCACATCCACGACGATCTCGATGTTCTGGAAATGGAGGAGAGGGAGAAGGTGGTGAAGCACATGTGGGATGTGTACACCAACAGCCGGCGGAGCAGATTGCCGAGATTCTGGCAGGAGGCATTCGAGGCTGCATACGAGGACTTGACAAATGACGACCCTGGTGTTCGAGAGGATGCCATATCCGAGATCGTTAGGATGTCTGTGAGGAACATCGATCTCGATCCGCCTCTTATCCAATCAACGGTTTCACAAGAACTAGGTAAGAGTTTGAAGCAATCAACAAAAGACATGGTGGCAGTAACCTCATCAGGGAATAATAGTCAATAA 537 0.5121 MKDDDSLPTTAPTTNAKKDSSDASVFGRGRYKFWALAAILLLAFWSMFTGTVTLRWSAGNLNHISDDLDSHIHDDLDVLEMEEREKVVKHMWDVYTNSRRSRLPRFWQEAFEAAYEDLTNDDPGVREDAISEIVRMSVRNIDLDPPLIQSTVSQELGKSLKQSTKDMVAVTSSGNNSQ* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1111 178 PANTHER OS03G0411600 PROTEIN 1 166 IPR010608 -
Vvi4g1111 178 Pfam Protein of unknown function (DUF1195) 8 146 IPR010608 -
Vvi4g1111 178 MobiDBLite consensus disorder prediction 7 21 - -
Vvi4g1111 178 MobiDBLite consensus disorder prediction 158 178 - -
Vvi4g1111 178 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1111 Vvi-Chr4 18054008 18064012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1111 - - jre:108995352 259.61