Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1110 ATGAGGAAACTCTGTCCAAATTTTGATCGAGATGATGGCTTGGAGACCGTCCTTGAGGTCCCAATCCCAGAAGAAATGTTCAATAGCATGGGCAGCAACCTTGCTCTTCGCTGTCACAACATGCTCACCTGGATGAAGGCTCAAACTGCAGAGAAATGGTCGTCGCCCATCATCGCCGGACGTTTTAATGAGTTATCCTTTCTTCTCTACATTGTTGGATCCCCTCTTATTCCTCTTCAGGTCAGATTGGACAACTCCGTCCACCGTCCCATCAGAGATAGTTCCATTGAAGCTTCCACAGCCAAGTATATTGTACAACAGTATATAGCAGCAACAGGAGGGCAACCAGCGCTGAGCTCAGTGAACAGCATGTGTGCAATCGGACAGGTGAGGATCAGTGCATCAGAGTTTTACCAAAGCGACCTACACGTGAAGGTGGGTACTACTGAAGAGATCGGAGGATTTGTGCTTTGGCAAAAGAATCCGGATATGTGGTGGTTAGAGCTCGTTGTGTCAGGTTGCAAGGTGATATCTGGTAGCAATGGCAAGCTTTCATGGAGGCAGTGCTCAAACCAGCAATCACCCATCTCCAAGGGTGCCCCCAGACCCTTGCGTCGTTTTCTACAGGGGTTGGATCCGAGGTCCACAGCCAACCTATTTATTGACGCGGTCTGCATCGGGGAGAAAATAATAAACAACGAGGACTGTTTCATACTGAAGCTGGAGACGAGCAGGGCAGTACGGGAGGCACAAAGCAGCCCAAAGTTTGAAATCATCCACCACACAATCTGGGGGTATTTCAGCCAGAGGTCGGGCCTCCTCATGCAGTTTGAGGACTCGAGGCTGCTGAGGATGAACACGGAGGGGGACGACGGCGTGTTCTGGGAGACAAGCTCGGAATCAGTGATAGAGGACTACAGATACGTGGATGGAGTGAACATAGCCCACAGTGGTAAGACAGTGGTGACGGTGTTCAGATATGGATCACATTCCGCCAGTCACAAGAGGGAGATGGAAGAAACGTGGAGGATTGAAGAGGTGGATTTCAATATATGGGGTTTGTCCAATGATTTTTTTCTGCCTCCCCCCTGA 1092 0.4982 MRKLCPNFDRDDGLETVLEVPIPEEMFNSMGSNLALRCHNMLTWMKAQTAEKWSSPIIAGRFNELSFLLYIVGSPLIPLQVRLDNSVHRPIRDSSIEASTAKYIVQQYIAATGGQPALSSVNSMCAIGQVRISASEFYQSDLHVKVGTTEEIGGFVLWQKNPDMWWLELVVSGCKVISGSNGKLSWRQCSNQQSPISKGAPRPLRRFLQGLDPRSTANLFIDAVCIGEKIINNEDCFILKLETSRAVREAQSSPKFEIIHHTIWGYFSQRSGLLMQFEDSRLLRMNTEGDDGVFWETSSESVIEDYRYVDGVNIAHSGKTVVTVFRYGSHSASHKREMEETWRIEEVDFNIWGLSNDFFLPPP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1110 363 PANTHER LIPASE 1 362 IPR006873 -
Vvi4g1110 363 Pfam Protein of unknown function (DUF620) 124 362 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1110 Vvi-Chr4 18049981 18052659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1110 - - vvi:104879139 742.651