Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1107 ATGAGCGTATCTTCCTCAGTGTGGTTGCCCTACAAGTTCTTATTTACCTTCTTATACTTGAGCTTCTGGTTTTGTCCTCAGTCAACACTTCAATTGTCTGTTTCTACCCTGTTTTTATTTTTCTGCACATACTCTTTCTTACCTCACTTGAATGAACTGAACCGATCCCCACAAAATCAAATTCCAAATTATTCTCAATGGGATGAAGCCATGATGAGCAAAGAATTAAAGCAAGTTTTGATCCCTGGTCCACTGATCATTGGTGCTGGGCCTTCAGGTCTTGCTGTAGCTGCATGCCTTAAAAAAAGAGGAGTACCCTCGTTGATCCTGGAGAAGGAGAACTGTATGGCCTCCTTATGGAATCTGAAGACATACGACCGTCTAAGACTCCACCTCCCAAAGAAGTTCTGTGAACTTCCTTACATGAAATTTCCTTCAGAATTTCCAGCTTACCCGACAAAGCAGCAGTTTATAAGTTACTTAGAGGATTATGCTAAAAGCTTCTCAATTGAGCCCATGTTTGGACAGGAGGTTCGATGGACTAAGTATGATAGAAGCATGAGACTGTGGCAGGTAGAAGCCAAAGAATCCAAGTTTCTGTGCCGGTGGCTCATTGTGGCTACTGGTGAGAATGCGGAACCAGTGGTACCAGAGATTGCGGGCATCTCGAATTTTGGAGGAAGATTGCTGCACACTAGCATATACAAGAATGGAGCTGATTTCAAAGGAAGTAAGGTTTTGGTTGTGGGCTGTGGCAACTCTGGCATGGAAGTTAGTTTGGATCTATGTAATAGTGGTGCTCAAGTTTCTTTAGTAGTGAGAGATAAGTTGCATGTTTTGCCCAGAGAAATATTTGGAATCTCCACCTTTGCTCTGTCCATGTGGCTGCTAAAATGGTTTCCAGTAAGCTTAGTTGATGGGTTGATCCTCCTATGTTCACGGATGATCCTTGGAGACACAGGCCAAATTGGGATCAAAAGACCAGAATTCGGTCCCCTTCACCTGAAGAATGCTACAGGAAAGACCCCAGTATTGGATGTCGGTGCTGTAGCTAAAATCAGGTCTAGTGAGGTGAAGGTGGTTTGTGGCATTCGAAGATTCACAGCTAAAGGTGTAGAATTTGTGAATGGAGAAGTACAGGAGTTCGACTCAGTAATCCTAGCGACAGGTTATAGAAGCAACGTAGCCTCATGGCTCAAGGAGGGCAACTTCTTCAGTCAGAAAGACGGTTATCCCAAAAATCCATTCCCAAACAATTGGAAAGGCGAGGATGGCGCATATAGCGTTGGCTTCACCAGGCGAGGCTTGTATGGGGCTTCAATTGATGCTCAGAGAGTAGCAGAAGATATTGCAAGGCAATGGAAATCCCAAATGAAGCATTTGCATCTTGACTTATAG 1398 0.4392 MSVSSSVWLPYKFLFTFLYLSFWFCPQSTLQLSVSTLFLFFCTYSFLPHLNELNRSPQNQIPNYSQWDEAMMSKELKQVLIPGPLIIGAGPSGLAVAACLKKRGVPSLILEKENCMASLWNLKTYDRLRLHLPKKFCELPYMKFPSEFPAYPTKQQFISYLEDYAKSFSIEPMFGQEVRWTKYDRSMRLWQVEAKESKFLCRWLIVATGENAEPVVPEIAGISNFGGRLLHTSIYKNGADFKGSKVLVVGCGNSGMEVSLDLCNSGAQVSLVVRDKLHVLPREIFGISTFALSMWLLKWFPVSLVDGLILLCSRMILGDTGQIGIKRPEFGPLHLKNATGKTPVLDVGAVAKIRSSEVKVVCGIRRFTAKGVEFVNGEVQEFDSVILATGYRSNVASWLKEGNFFSQKDGYPKNPFPNNWKGEDGAYSVGFTRRGLYGASIDAQRVAEDIARQWKSQMKHLHLDL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1107 465 PRINTS FAD-dependent pyridine nucleotide reductase signature 245 263 - -
Vvi4g1107 465 PRINTS FAD-dependent pyridine nucleotide reductase signature 84 103 - -
Vvi4g1107 465 Pfam Pyridine nucleotide-disulphide oxidoreductase 85 276 - -
Vvi4g1107 465 Gene3D - 84 461 IPR036188 -
Vvi4g1107 465 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 210 - -
Vvi4g1107 465 PRINTS Pyridine nucleotide disulphide reductase class-II signature 83 105 - -
Vvi4g1107 465 PRINTS Pyridine nucleotide disulphide reductase class-II signature 241 265 - -
Vvi4g1107 465 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 80 459 - -
Vvi4g1107 465 SUPERFAMILY FAD/NAD(P)-binding domain 244 454 IPR036188 -
Vvi4g1107 465 SUPERFAMILY FAD/NAD(P)-binding domain 85 277 IPR036188 -
Vvi4g1107 465 FunFam Flavin-containing monooxygenase 84 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1107 Vvi-Chr4 18026489 18028680 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1107 K11816 - vvi:100252977 952.199