Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1103 ATGGACCTAGACGACCTAGATGGTCCGAACCGGGCTCCTGTGAGGCGGCCCTCCCGTTTCGCACCCAAATCCTCCAAACCTAAGCTCATCCCAAAACCAGAACCATCATCTCAACCTGAACCATCCAAGCTCGATGATGTAACTCTTATCAATAAGAAGGAAGAAGACTCTCAACCTCCGCTGGTCAAGAAAGCTGACGAGCCCTTCGCTTCATCTACTCAAAACGGCGTTATCGAGATGGAGGTGGAAGCCAAAGCGGAAGTGGAGGACGCCATGGAGGAAGACGACCGCGATGAAGATCCAGTGGTCCGTGAAATTGATGTCTTCTTCACTCCGCCTCCCACTGATGACAACACTAAGATATATGTTCTGCAGTATCCTCTAAGACCGTACTGGCGTCCGTACGAATTGGGCGAAAGATGTGATGAGGTTAGGGTGAAACCTGCTAGCGCAGAAGTAGAAGTGGATTTGTCTATTGATGTCGATTCCAAAAATTATGATCCTGATGCTCCTAATGCGCAGAGGATGAAGAAGCAGACTTTGTCGACTTCATGGAAACCACCTCAAACAACTGGCTATGTCGTAGGAGTTTTGATGGGGAATAAGCTACACCTGAATCCTATTCATGCAGTGGTGCAGCTCCGGCCATCAATGGAATATCTGAGTTCTGGTGGTGCAAAAAGAAAGAACAATGTTACAGGCGACACAAACAGTGCAGTTAAGCTAGAGGTTTCTAACGAAGAAGAATCTGTTGGGTCATTGAAGAAACAGAACAAGATAATGGGAATTTTGGATGAGCAAAACACAGATGCTGCAGAGAGTTGGGTTCCACTCAAGTACCATAGCTCGGAGAGTGATTTCTCAGCAAGATATCTACAAAAAATGGTGGCAGAAGACAACTCTCCTATCCAGTTTTTAATGAGCCCGTATGAATATGTCAACTCCTTGTGTCCCCCCGGAGTGTCTAATGATGATAACAGATCAAAAGGTCTTTCAAGAAGGTTCTTACTTTCAATGCCTCTGGAAGAACGTTTTAAGACATTGCTTTGTGAGGGGCCTCCAGTTCATCGATTCAGTGCTCTTAAGCACTTCGCTCCTGATAACTCTGTTGAAGATGTTCTAGGAGTCCTTACGAAACATGCTCATTTAGTGCAAGGACTGTGGGTTCCAAAGAGTTCATTGTTATTTCCTGGAGGTCAAGGTGTTGCACCATTAGCTAGAGATTACATTCTTCTTTTATTTAGCAAGGGTCCTTTAATCAACTATTCTCAAGTAGACGTTCCAGGATCTCTTAATAAAGCTCTGAAGGGCTTTCTGAGTATATTAGCTGTCGAAAGACCTTCCTTTAGGGATTGGAAGTTTAAAGAGCCTACAGATGTGTCATTTATGAAACTGCATCCAGACATTGTTAGGGAGCAAAGACGAGTTTGGGAAAGTCTGGAAAAACAGATAACTGATATTATTCATGGAGGTGGAAGGAGAGGTCCTGTCACAAAGAATTCTGGGAAGCCTAGCATTGCAAATAAAACTGGAACATCAACAAAATCTGATGGAGCAACAAGAGCTACAAATGGAACCCCTGTCAGGAGAACAGCCATGTCAGCCGAAACTCGAGAAGCTCTACCAAAAGCTCTGGAAGAAGTTTTTAGATTGCACAAGGTTTGCAGCTTCCAACTGATTTGCCAAGCTTTGCGGGATTTAGCGGTTTCAAAGTCTACTAGCCCAAAGGTGGATCCTAGGACATTTGTGGCTGCAGCATACGGTGCTGATGCTCCTCAAGAGGAGTTGCATGCAATTATAAGTAAATATGCAACAACTGTACATGGTGTTTATGTTTGGAAGACTTCTGAACATTCAGAACACAATCCATTAAGGAAAGTTGTCGTTGATCTTTTTTGTGGAAAAGAACCTAATGCTAAGCTTAAGAGGGCTGATATCATGGAAGCTGCCAAGATTGCGCTTAAAAAAGAGATCACCACCCATGAATATAACAAGGTTGTAAGTGAATTATGTGAATCCAGGGGCTCTCTGTGGGTTTTGAAAAGCGGTGATGGAAAGCCAAAATGA 2067 0.4393 MDLDDLDGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTLINKKEEDSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1103 688 MobiDBLite consensus disorder prediction 164 184 - -
Vvi4g1103 688 MobiDBLite consensus disorder prediction 1 74 - -
Vvi4g1103 688 PANTHER DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 81 489 IPR006886 GO:0005634|GO:0006351
Vvi4g1103 688 MobiDBLite consensus disorder prediction 488 535 - -
Vvi4g1103 688 Pfam RPC5 protein 98 485 IPR006886 GO:0005634|GO:0006351
Vvi4g1103 688 MobiDBLite consensus disorder prediction 501 531 - -
Vvi4g1103 688 MobiDBLite consensus disorder prediction 46 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1103 K14721 - vvi:100247859 1293.1