Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1101 ATGCGTTGCTTCATGCGTTACTCACCGGGAAATTTTGTGACAGTCCCAATACTTTCAGAACTTTGCACTTTCTGTGTGAGAGGTGCTATTAAATTGTCACCTGGTAGTGATAATCATGATTTGACAGATGAAAAAGATCCTAAGATTGTTTACCATGGGTACAACTCATCTATAGTGAGAAAAGCTTCGCTTTTCTCTCTCGTCTTCTGCTACTTCTCAACACCTCCAGGACCTGCTATTACTTTCATGACATTTCCAGAAGTGAATGAGATCCTCAAGGGTGCGGTTGTATATTCTGTATTATTCCTCAGGGCTTCCATCACTGCTGCTCTTCACTGGTTCGTAAGCCCGTACGCACACAAACTCTGA 369 0.4255 MRCFMRYSPGNFVTVPILSELCTFCVRGAIKLSPGSDNHDLTDEKDPKIVYHGYNSSIVRKASLFSLVFCYFSTPPGPAITFMTFPEVNEILKGAVVYSVLFLRASITAALHWFVSPYAHKL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1101 122 PANTHER UNCHARACTERIZED 35 122 IPR009724 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1101 Vvi-Chr4 17953647 17954015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1101 3 52 Calmodulin-binding Proteins AT3G56690 42.308 8.18e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1101 - - vvi:100266780 105.531