Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1096 ATGGTATTTTATGTACACACGGGGAGTGGGAAGTTAAATTGGGCCAACGAAGAAAAGGAGAAGACGACACTGACAGCATTAAGACGGGGTGATGTGTATAGGCTGAAGCCAGGGACTGTTTTCTACTTGCAGAGCAACTTAGAATCAGAGAGGGAGAAGCTTAGAATTTATGCCATCTTTGTTAACTTAGAAGATGGCGATTTAAATGAGGTATCATCAATTGGGGCATATTCTAGCATTAGCGACCTGGTCCGGGGCTTTGATAAGAAAGTTCTCCAAGCTGCTTTTGAGGTCTCTGAGGAACTGATAGAAGCAATAACAAATGCAACCAAGCCACCTGCTATTGTCCATAATGTGCCAGCAAGATCAGAGAATCTGTGGGGGTGGGAAGCTCGATTCCTTAAAGCCTTTATTGGAAGCCAAGGCCACAGCATTTATGATTTGGAGAACAAAAAGAAGGCAGCCAAGACATTCAATATTCGAGATGCGGATCCAGACTTTGAGAATTGTAATGGACGGGCCTTGACGGTGACCACCAAAGACATGAAAGTATTGAAGGGTTCCAACATTGGAATTTTCATGGTGAACCTGACAAAGGGTTCAATGATGGGGCCGCACTGGAATCCATTGGCTACTGAGATAGCAGTAGTCTTAGAAGGGCAAGGGATTGTTCGGGTGGTTTGTTCTAGCAACACTACGAAATCAAGTTCAAGCAACACTACGAAATCAAGTTCCAGCAACTCTACCAAATTCAAGTGTGAAAACAGGAGTTTTAGGGTGAGGGAAGGAGATGTTTTTGTTGTCCCAAGGTTCCATCCCATGGCTCAGATGTCCTTCAATAATGGCTCCTTGGTGTTTATGGGATTCAGCACAGCCTCAAAACTGAATCATCCTCAATTCCTAGCAGGAGAAAGCTCTGTTCTCCGAACTCTTGACAGGGATGTGTTAGCTGCAGCCTTCAATGTTTCCAACACAACCATGGATCAGTTTCTGACTCCTCAGCGTGAGTCTATCATCTTAGATTGCACTAGTTGCGCTGAGGAGGAGGCAAGGATGATGGAAGAGGAAATTGAAAAGAAAAGGCAAGAGGAGGAAGCTAGGAAGGAGGAAGAAGAGAGAAAGAGGAAGGAGGAGGAAGCCAAGGAGGAGGAAGAAGAAAAAAAGAGGGAAGAGGAGGAAGCCAGGAAAAGAGAGGAAGAGGAGAAAAAGAGGGAGGAAGAGGAAGCCGAAGCCAGAAAGAGAGAGGAAGAAGAGGCAAAAGAGGAAGATAGGAGAAGGGAAGCAGCAGCAGAAAGGGAGCAAGAGGAGGCAATGAGAGAAGAAGATGAGAGACAAAAGAGGGAGAGGGAAGAGGAGAAGTATGAAAAGGAGAAAAAGAGGGAGGAAGAGGAAGGCAAAGCCAGAAAGAGAGAGGAAGAAGAGACAAAAAGGGAAGAAGATAGGAGAAGAGAAGCAGCAGCAGAAAGGGAGCAAGAAGAGGCAATGAGAGGAGAAGAAGAAAGACAAAAAAGAGAGGGGGAAGAGGTGAAGTATGAAATTGGGGGTGGTGGGGAGGGAAAAAGAGCAGAGTATTGA 1575 0.4552 MVFYVHTGSGKLNWANEEKEKTTLTALRRGDVYRLKPGTVFYLQSNLESEREKLRIYAIFVNLEDGDLNEVSSIGAYSSISDLVRGFDKKVLQAAFEVSEELIEAITNATKPPAIVHNVPARSENLWGWEARFLKAFIGSQGHSIYDLENKKKAAKTFNIRDADPDFENCNGRALTVTTKDMKVLKGSNIGIFMVNLTKGSMMGPHWNPLATEIAVVLEGQGIVRVVCSSNTTKSSSSNTTKSSSSNSTKFKCENRSFRVREGDVFVVPRFHPMAQMSFNNGSLVFMGFSTASKLNHPQFLAGESSVLRTLDRDVLAAAFNVSNTTMDQFLTPQRESIILDCTSCAEEEARMMEEEIEKKRQEEEARKEEEERKRKEEEAKEEEEEKKREEEEARKREEEEKKREEEEAEARKREEEEAKEEDRRREAAAEREQEEAMREEDERQKREREEEKYEKEKKREEEEGKARKREEEETKREEDRRREAAAEREQEEAMRGEEERQKREGEEVKYEIGGGGEGKRAEY* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1096 524 MobiDBLite consensus disorder prediction 355 524 - -
Vvi4g1096 524 Gene3D Jelly Rolls 1 126 IPR014710 -
Vvi4g1096 524 PANTHER OS03G0336100 PROTEIN-RELATED 1 345 - -
Vvi4g1096 524 Pfam Cupin 158 326 IPR006045 -
Vvi4g1096 524 Coils Coil 343 507 - -
Vvi4g1096 524 CDD cupin_7S_vicilin-like_N 1 117 - -
Vvi4g1096 524 SUPERFAMILY RmlC-like cupins 2 118 IPR011051 -
Vvi4g1096 524 CDD cupin_7S_vicilin-like_C 165 337 - -
Vvi4g1096 524 Gene3D Jelly Rolls 150 343 IPR014710 -
Vvi4g1096 524 SMART Cupin_1_3 158 328 IPR006045 -
Vvi4g1096 524 SUPERFAMILY RmlC-like cupins 134 341 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1096 Vvi-Chr4 17884441 17886530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1096 1 349 Miscellaneous Gene Families AT2G18540 51.821 7.19e-119 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1096 - - vvi:100256465 658.292