Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1094 ATGGCTCTTCTGGGATCCACCGTCGCGAGGGAGGTTGGGTTGCGATTGCTCCTTTGCCCACTTGGTTCTAACAATATTGTAATTCGAACAGCATGCTGTTCTGTGGGTATTGTTTTGCCTGTGTACTCTACATTCAAGGCTATCGAGAGGAAAGATCAAAATGAGGAACAAAGGTGGCTTTTATATTGGGCAGCTTATGGATCTTTCAGCTTAGTGGAAGTGTTTGCTGACAAACTTATATCTTGGTCTCCACTGTACTATCATCTCAAGTTTGCATTTCTTGTTTGGCTTCAATTTCCATCTTCTGGTGGTGCAAGGCATTTATATATGTGCTACCTGCGTCCGTTCTTCTTGAGGCATCAAGCCAGAATTGATCAAGTTGTGGGCTCTGCATATGGTGAAATGGTGAAGCTCATGAGTTCACACCAAGCAGAAATCCAGGCTGCCAGGACTCTATTCACAACTATTATGGCATCAGCGAACCAAATATTAAGGGGTGAAGTTACCTCGGTTCAACCACAATCGCAGAATGTGGTTGAAGGGCAGAGAAGAATAATTTCAGATTCTGGGTCAGACCTTGATGATTGA 588 0.4388 MALLGSTVAREVGLRLLLCPLGSNNIVIRTACCSVGIVLPVYSTFKAIERKDQNEEQRWLLYWAAYGSFSLVEVFADKLISWSPLYYHLKFAFLVWLQFPSSGGARHLYMCYLRPFFLRHQARIDQVVGSAYGEMVKLMSSHQAEIQAARTLFTTIMASANQILRGEVTSVQPQSQNVVEGQRRIISDSGSDLDD* 196
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1094 195 Pfam TB2/DP1, HVA22 family 40 116 IPR004345 -
Vvi4g1094 195 PANTHER HVA22-LIKE PROTEINS 28 142 IPR004345 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1094 Vvi-Chr4 17864487 17876114 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1094 K17279 - vvi:104879140 382.104