Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1089 ATGGGGAAAGGAGGAGGCTGTGTTCCCAGCAAGAAAAAATTACCCTCGGCGACAGCCGATGAAGGCCCACCTAGCGCCAGGGACGCCCCCATTCCGGCCCAGGACAACAGCCCCGAGGCCCCCGCATTGGATGTGGACGGCGTAGTCACTGATCCAATTGCCAAATTGAAGATATTCGTCGTGTTCTATTCCATGTACGGCCACGTTGAAGGCTTGGCTCGGAGGATGAAGAAGGGTGTGGATGGGGTTGATGGACTTGAGGGGCTTTTGTTTCGGGTTCCTGAGACGTTGCCAATTGAGGTGTTGGAGCAGATGAAGGCGCCGCCCAAGCCCGACGATATTCCGGAGATATCCGCGGCGGAGTTGACGACGGCTGATGGGATACTGTTTGGGTTTCCGACGAGGTATGGATGTATGGCTGCTCAGATGAAGGCTTTCTTTGATTCAACGGGGCAGTTGTGGAAGGAGCAGCAGCTCGCCGGCAAGCCGGCGGGGTTCTTCGTGAGCACTGGGACTCAAGGAGGTGGCCAAGAAACCACTGCGTGGACCGCAATCACCCAGTTAGCTCATCATGGAATGCTGTTTGTTCCTATTGGGTACACCTTTGGGGCTGGTATGTTTAAGATGGACTCCATTCGCGGGGGTTCTCCATATGGGGCTGGAGTTTTTGCTGGTGATGGCACAAGGCAACCAAGTGAAACAGAGCTGGCACTTGCAGAGCATCAGGGCAAATATATGGCTGCAGTGGTTAAAAGACTTGCCCAAGCTTGA 771 0.5486 MGKGGGCVPSKKKLPSATADEGPPSARDAPIPAQDNSPEAPALDVDGVVTDPIAKLKIFVVFYSMYGHVEGLARRMKKGVDGVDGLEGLLFRVPETLPIEVLEQMKAPPKPDDIPEISAAELTTADGILFGFPTRYGCMAAQMKAFFDSTGQLWKEQQLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGDGTRQPSETELALAEHQGKYMAAVVKRLAQA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1089 256 Gene3D - 54 254 IPR029039 -
Vvi4g1089 256 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 57 255 - -
Vvi4g1089 256 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 57 253 IPR010089 GO:0003955|GO:0010181
Vvi4g1089 256 MobiDBLite consensus disorder prediction 1 43 - -
Vvi4g1089 256 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 55 255 - -
Vvi4g1089 256 Pfam NADPH-dependent FMN reductase 72 198 IPR005025 GO:0016491
Vvi4g1089 256 ProSiteProfiles Flavodoxin-like domain profile. 58 246 IPR008254 GO:0010181
Vvi4g1089 256 SUPERFAMILY Flavoproteins 57 253 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1089 Vvi-Chr4 17782451 17785390 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1089 K03809 - vvi:100247950 504.982